GitHub

https://github.com

Updated 6 months ago

data-formats • Science 54%

Protobuf file format definitions

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blas-ext-base-ndarray-sindex-of • Science 44%

Return the first index of a specified search element in a one-dimensional single-precision floating-point ndarray.

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blas-ext-base-ndarray-glast-index-of • Science 44%

Return the last index of a specified search element in a one-dimensional ndarray.

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stats-strided-dsemyc • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using a one-pass algorithm proposed by Youngs and Cramer.

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array • Science 57%

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pyani-plus • Science 67%

Development repo for pyani-plus (the next iteration of pyani)

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stats-strided-dsemch • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using a one-pass trial mean algorithm.

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community • Science 44%

Stylescape | Community Resources

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sixarm_debian_postgresql_packages • Science 44%

SixArm.com » Debian » PostgreSQL packages for databases

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smoreglos • Science 67%

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stringinator • Science 44%

Find the most popular, longest and frequent strings and characters

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minchoc • Science 44%

Minimal Chocolatey-compatible NuGet server in a Django app.

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ndarray-base-some-by • Science 44%

Test whether at least `n` elements in an ndarray pass a test implemented by a predicate function.

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predatory_oa • Science 44%

Notes for a training session for Doctoral Students : how to avoid predatory open access publishers

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rdm-guidelines • Science 44%

This is the repository for SciLifelab Research Data Management (RDM) guidelines, a central resource to provide information about data management.

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carl_tf_test • Science 54%

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matplot • Science 44%

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c • Science 54%

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verisnip-tool • Science 44%

My Verilog Template is a project that I will be working on my free time. The project aim is to compile and elaborate Verilog modules. The Verilog cores are written in traditional Verilog and might use `include "file" to add automaticaly generated code.

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isopredict • Science 44%

A program for training, testing, and applying isotopic models for region-of-origin prediction in Latin America.

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constants-float32-max-safe-nth-double-factorial • Science 44%

Maximum safe nth double factorial when stored in single-precision floating-point format.

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engine-framework • Science 67%

The repository of the EnGINE framework used for reproducible large scale experiments.

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batchalign_app • Science 57%

A front-end web app for Batchalign2, with enhancements for use by the School of Psychology at Trinity College Dublin.

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failing-qc • Science 67%

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emsoftoo • Science 52%

Object Oriented version of the EMsoft package (beta)

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joegwtest • Science 44%

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sinfony • Science 57%

Source code for research papers about the semantic communication approach SINFONY

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science-impacts-industry • Science 44%

Science Impacts Industry: Investigating the Relationship Between Scientific Advancements and Industrial Funding

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3dobjectreconstruction • Science 44%

3D Object Reconstruction project is a workflow that takes a set of stereo images and camera info and outputs a textured mesh (i.e., .OBJ file). The purpose is to translate physical items into the digital world in a photorealistic way

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NonparametricVI • Science 67%

Particle-based and nonparametric variational methods for approximate Bayesian inference and Probabilistic Programming

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privategpt • Science 44%

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parsnips • Science 44%

Generate, search, and cite SWHIDs for Python code fragments like classes, functions, and expressions.

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domino • Science 62%

A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity. Please be aware that an improved package, dominoSignal, is available.

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test • Science 52%

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bs-fetch-nf • Science 44%

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phosphine-sproj • Science 44%

Contains all of the supplementary data useful for my Senior Project on the spectrum of the Phosphine molecule.

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polyglot-scholarvault-20250722_175405 • Science 44%

Auto-exported from VibeSheet for idea 1256

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diagrams • Science 44%

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ananta-theory • Science 67%

A symbolic and falsifiable cosmology exploring time emergence, coherence, and fractal intelligence.

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labelbuddy-annotations • Science 44%

Annotations of academic papers. The papers were likely gathered using pubget, and the annotations made with labelbuddy

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gutanalysistoolbox • Science 49%

Analysis and characterisation of cells within the gut wall using deep learning models. The current focus is on studying enteric neurons and enteric glia.

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h2-opt-st-interp-num • Science 54%

Numerical examples of interpolatory necessary H2-optimality conditions for structured linear systems

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nestedsamplers.jl • Science 75%

Implementations of single and multi-ellipsoid nested sampling

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rdf-stax.github.io • Science 49%

Main repository of the RDF Stream Taxonomy (RDF-STaX)

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popglen • Science 54%

Bioinformatics pipeline to process whole genome resequencing data and perform genotype likelihood based population genomic analyses using ANGSD and related softwares. Flexible to datasets that combine high/low coverage and historical/fresh samples.

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cmem • Science 44%

This is the code for the Cusp Magnetosheath Emissivity Model (CMEM)

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plurals • Science 67%

Plurals: A System for Guiding LLMs Via Simulated Social Ensembles

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nf-core-rnaseqdge • Science 54%

example nextflow pipeline with nf-core modules: RNA-seq and differential gene expression analysis

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ivonesamplemr • Science 57%

Stata package for one-sample Mendelian randomization / instrumental variable analyses

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mevd-r • Science 57%

Metastatistical Extreme Value Distribution Regional Framework

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system-noise • Science 52%

System noise utilities and benchmarks for HPC

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protein-detective • Science 67%

Python package to detect proteins in EM density maps.

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merge_open_hospital_data • Science 67%

A repository to keep track of the merging of open health facility data for the afrimapr and covidza projects

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class-info • Science 44%

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bactmap • Science 67%

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scientific_research_scraper • Science 54%

[Python] Scraping tool for multiple databases using api's and ChromeDriver.

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kepingbi.github.io • Science 44%

Keping's personal website

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mrmagpie • Science 67%

The package provides cellular magpie related data via the madrat framework.

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INTR_AI • Science 44%

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repro • Science 54%

Lesson demo

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patroon • Science 67%

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sus-analysis-toolkit • Science 67%

A web-based analysis toolkit for the System Usability Scale providing calculation, plotting, interpretation and contextualization utility.

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imageomics-guide • Science 52%

Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows.

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mdance • Science 67%

MDANCE is a flexible n-ary clustering package for all applications.

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sparseposer • Science 54%

Official Code for ACM Transactions on Graphics (TOG) paper "SparsePoser: Real-time Full-body Motion Reconstruction from Sparse Data"

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fruit-recognition • Science 44%

Fruit Recognition

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hmm_kunitz_domain • Science 44%

Hidden Markov Model-based classification and structural validation of Kunitz-type protein domains. Includes sequence alignment, model training, validation on curated datasets, and structural quality assessment using PDBeFold and RMSD/Q-score analysis. Final project for the Laboratory of Bioinformatics 1 course at the University of Bologna.

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illuseqsweep • Science 44%

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riffle • Science 54%

Non-parametric randomized differential expression test for sparse data

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mdlr • Science 44%

Atomic web frontend library for use in accessible, responsive web apps