GitHub
goombay
Python implementation of several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show alignment, and display the underlying matrices.
agent-dialogues
Conversation simulation with AI agents to evvaluate behavior changes.
synthetic-overhead-wind-turbines
Synthetic Overhead Images of Wind Turbines Made to Mimic California and Arizona
pypi-qiskit-connector
Qiskit connector is quantum computing SDK extension which is a helper for Qiskit runtime service that streamlines authentication, plan detection, and backend selection for quantum computing algorithms. using Qiskit connector intelligence Core.
optimizvrmsinembedd
Efficient algorithm for VRMS calculation using FFT-based velocity spectrum with down sampling, window overlap, and robust scalar selection. Designed for real-time deployment on embedded systems in Industry 4.0 condition monitoring.
gru_aie
A low latency implementation of the Gated Recurrent Unit on the Versal AI Engines
lightweight-mcnnm
Lightweight Implementation of the Matrix Completion Estimator for Panel Data presented by Athey et al. (2021)
monofonic
High order LPT/PPT cosmological IC generator for single resolution cosmological simulations
https://github.com/deepset-ai/haystack-rag-app
An example of a RAG backend plus UI
cessda.cmv.documentation
Contains the documentation for the CESSDA Metadata Validator (CMV).
sed-eew-seiscomp-contributions
Libraries and modules for Earthquake Early Warning (EEW) contributed by the Swiss Seismological Service (SED) at ETH Zurich, base for the ETHZ-SED SeisComP EEW system (so-called ESE).
stabilo
🌀 Stabilo is a Python package for stabilizing video frames or object trajectories using advanced transformation techniques. It supports user-defined masks to exclude specific areas, making it ideal for dynamic scenes with moving objects. Unlike traditional stabilization, it stabilizes content relative to a chosen reference frame.
calm-pde
Official PyTorch implementation of the CALM layers and CALM-PDE model.
orthogonalchsh
Notebooks used for my Master thesis "Exploring the boundaries of quantum correlations: Bell inequalities, convex duality and self-testing".
sgpflowmatrices
R package containing sgpFlow coefficient matrices for sgpFlow analyses
biosiftr
BioSIFTR - Biome-specific Shallow-shotgun Inference of Functional Traits through Read-mapping
metagenomics-shell-workbench
Preview of carpentries-lab/metagenomics-shell transitioned to use the Workbench
quark-famework
Framework for Quantum Computing Application Benchmarking (until version 2.2)
observatorio
O Observatório é uma iniciativa que envolve o registro, o acompanhamento e a análise agregada e estruturada de dados de Programas de Pós-graduação Stricto Sensu do Brasil para divulgação transparente de suas atividades, planejamentos, ações e impactos, tornando-os acessíveis à sociedade
sort
The Self-Assessment of Organisational Readiness Tool is a self-assessment framework for organisations to evaluate and strengthen their research capabilities in healthcare practices.
spezispeech
Spezi Module to Support Speech-related Features Including Text-to-Speech and Speech-to-Text
genomenote
Nextflow DSL2 pipeline to generate a Genome Note, including assembly statistics, quality metrics, and Hi-C contact maps. This workflow is part of the Tree of Life production suite.
python-novice-programming-gapminder
An introduction to Python for non-programmers using Gapminder data
esmbenchmarkviz
A Python package for interactive visualizations for Earth System Model evaluation and benchmarking
https://github.com/cea-metrocarac/spectroview
SPECTROview : A Tool for Spectroscopic Data Processing and Visualization.
WilliamsonTransforms
Williamson and Inverse-Williamson transformations, in fully generic pure Julia.
https://github.com/deepset-ai/haystack-cookbook
👩🏻🍳 A collection of example notebooks using Haystack
spikingneuralnetwork
The aim of this project is to improve upon existing SNNs to make them more applicable, flexible and relevant. Can't say much more, but read here if you want to learn more: https://www.linkedin.com/pulse/bonxai-research-lab-solve-s%2525C3%2525A6b%2525C3%2525B8%3FtrackingId=Ud1ch3y8SDeKoYHXlHG1Zw%253D%253D/?trackingId=Ud1ch3y8SDeKoYHXlHG1Zw%3D%3D
casos
CaΣoS is a nonlinear optimization-oriented sum-of-squares toolbox based on the symbolic framework of CasADi.
compomix
A lightweight composite property calculator using Halpin-Tsai and Kelly-Tyson models for mechanical analysis of fiber-reinforced materials.
mpox-seek
A rapid pipeline for targeted and whole-genome ONT monkeypox sequencing
r-tidyverse-compact
Kompaktübersicht über Datenverarbeitung mit R tidyverse Paketen
zenodo-citation-example
Example of how to make GitHub repositories citable using Zenodo.
lang-gur
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Farefare language
https://github.com/deeprine/awesome-continual-learning
A paper list of our recent survey on continual learning, and other useful resources in this field.
kromosynth-render
gRPC rendering server, accepting URLs to genomes and returning a rendered sound.
stats-array-stdevyc
Calculate the standard deviation of an array using a one-pass algorithm proposed by Youngs and Cramer.
ai_bio_project
This is the carpentries repository for our funded project "How to Build FAIR Domain-Specific Datasets for fine tuning/training NLP models"
cats
Cluster Analysis of Trimmed Spectrograms: framework for detection and denoising of sparse signals in time-frequency domain.
ss-nes-lesson
Training material of the software sustainability of the TDCC NES project
scientific_programming_course
Course material for Scientific Programming with Python given at University of Applied Science Bonn-Rhein-Sieg.
ml-mix
Package for ML/ML Force Mixing with Machine Learning Potentials in LAMMPS
aeon_mecha
Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.
3d_very_deep_vae
PyTorch implementations of variational autoencoders for 3D images
cse-repo-of-advanced-computation-ml-and-systems-engineering
An independent open-access publishing archive maintained by Allan.
schema
This repo collects the descriptions of the structure and the validation constraints of tools in the railtoolkit in JSON schemas. It is, therefore, an alternative to RailML.
isabelle_dof
Isabelle/DOF is a novel Document Ontology Framework on top of Isabelle. Isabelle/DOF allows for both conventional typesetting as well as formal development.
led-net
LED-Net: A lightweight and efficient dual-branch convolutional neural network designed to address the challenge of achieving high-performance tree branch and trunk semantic segmentation in resource-constrained mobile device environments.
uninfo
The official code for "Uniformity First: Uniformity-aware Test-time Adaptation of Vision-language Models against Image Corruption."
def-au-asls-landform
Machine-readable representation of the classifiers described in chapter 5 Landform, by J.G. Speight, in Australian soil and land survey field handbook (3rd edn)
