https://github.com/climate-service-center/dacstore • Science 49%

Acceptance analysis DACStorE

https://github.com/climatecompatiblegrowth/geo-x-data-prep • Science 49%

Spatial data preparation tools for GeoH2 users.

https://github.com/clir-abvi-portal/clir-abvi-portal-aaslh • Science 44%

https://github.com/cmendl/rqcopt_hpc • Science 49%

HPC implementation of Riemannian quantum circuit optimization

https://github.com/coderefinery/testing • Science 57%

Automated testing - Preventing yourself and others from breaking your functioning code

https://github.com/coin-or/symphony • Science 49%

SYMPHONY is an open-source solver, callable library, and development framework for mixed-integer linear programs (MILPs) written in C with a number of unique features

https://github.com/comp-physics/meshfreetrixi.jl • Science 49%

Meshfree extension to Trixi using RBF-based numerics

https://github.com/compiler-campusminden/cpl-vorlesung-master-w25 • Science 44%

Lecture "Concepts of Programming Languages" (M.Sc.) (Winter 2025/26)

https://github.com/computational-biology-aachen/synechocystis-photosynthesis-2024 • Science 49%

A mathematical model of photosynthetic electron transport in Synechocystis sp. PCC 6803

https://github.com/conect2ai/sbai2025-tensorflores • Science 49%

https://github.com/corybrunson/ordr • Science 49%

manage ordinations and render biplots in a tidyverse workflow

https://github.com/cosbidev/ostransformer • Science 49%

Official implementation for the paper ``A Deep Learning Approach for Overall Survival Prediction in Lung Cancer with Missing Values´´

https://github.com/cosmo-pop/flowfusion • Science 54%

Generative modelling using diffusion models and flow-matching

https://github.com/cpanse/fgczqcms • Science 46%

https://github.com/crsu-apps/popviz • Science 49%

A visualisation package to show absolute effects as a proportion of people

https://github.com/csinva/clinical-rule-development • Science 49%

Building and vetting clinical decision rules.

https://github.com/cthoyt/wikidata-client • Science 54%

https://github.com/ctu-vras/monoforce • Science 49%

[IROS 2024] [ICML 2024 Workshop Differentiable Almost Everything] MonoForce: Learnable Image-conditioned Physics Engine

number-float64-base-assert-is-same-value-zero • Science 44%

Test if two double-precision floating-point numbers are the same value.

assignment1 • Science 44%

https://github.com/cwwhitney/urban_school_gardens • Science 49%

Decision model on investment in urban school gardens for food environment outcomes (Hanoi, Vietnam case)

https://github.com/cyclotronresearchcentre/bidsme_containerisation • Science 44%

Bringing BIDSme into a container, then NeuroDesk

https://github.com/danielathome19/engram-neural-network • Science 49%

tensorflow-engram: A Python package for Engram Neural Networks, adding biologically-inspired Hebbian memory and engram layers to TensorFlow/Keras models, supporting memory traces, plasticity, attention, and sparsity for neural sequence learning.

https://github.com/danielenricocahall/danielenricocahall • Science 49%

https://github.com/danielenricocahall/keras-unet • Science 49%

Implementation of U-Net in Keras

https://github.com/data-science-in-mechanical-engineering/mixed_precision_for_jax • Science 57%

A repository for Mixed Precision Training in JAX based on Equinox.

https://github.com/dataunitylab/jsonoid-discovery • Science 57%

Distributed JSON schema discovery

Graphem - JAX: Node Influence Maximization via Geometric Embeddings • Science 98%

Graphem - JAX: Node Influence Maximization via Geometric Embeddings - Published in JOSS (2025)

Pi4Micronaut: A Java Library for IoT Research Instruments on Raspberry Pi • Science 93%

Pi4Micronaut: A Java Library for IoT Research Instruments on Raspberry Pi - Published in JOSS (2025)

@stdlib/array-empty-like • Science 44%

Create an uninitialized array having the same length and data type as a provided array.

qsort R package — Peer-reviewed • Science 93%

qsort R package: A New Tool for Scoring Q-sort Data - Published in JOSS (2018)

complexity-in-complexity • Science 54%

Code for "Complexity in Complexity: Understanding Visual Complexity Through Structure, Color, and Surprise". CogSci, 2025 & ICLR Re-Align Workshop, 2025.

OrbDot — Peer-reviewed • Science 93%

OrbDot: A Python package for studying the secular evolution of exoplanet orbits - Published in JOSS (2025)

ginjax — Peer-reviewed • Science 93%

ginjax: E(d)-Equivariant CNN for Tensor Images - Published in JOSS (2025)

GraphCalc — Peer-reviewed • Science 93%

GraphCalc: A Python Package for Computing Graph Invariants in Automated Conjecturing Systems - Published in JOSS (2025)

scmorph — Peer-reviewed • Science 98%

scmorph: a Python package for analysing single-cell morphological profiles - Published in JOSS (2025)

slap2-utils — Peer-reviewed • Science 93%

slap2-utils: Tools for Processing SLAP2 Data - Published in JOSS (2025)

CaNS-Fizzy — Peer-reviewed • Science 93%

CaNS-Fizzy: A GPU-accelerated finite difference solver for turbulent two-phase flows - Published in JOSS (2025)

TMLE.jl — Peer-reviewed • Science 98%

TMLE.jl: Targeted Minimum Loss-Based Estimation in Julia - Published in JOSS (2025)

MCSimMod — Peer-reviewed • Science 93%

MCSimMod: An R Package for Working with Ordinary Differential Equation Models Encoded in the MCSim Model Specification Language - Published in JOSS (2025)

Snowdrop — Peer-reviewed • Science 93%

Snowdrop: Python Package for DSGE Modeling - Published in JOSS (2025)

smolyax — Peer-reviewed • Science 98%

smolyax: a high-performance implementation of the Smolyak interpolation operator in JAX - Published in JOSS (2025)

ChemInformant — Peer-reviewed • Science 98%

ChemInformant: A Robust and Workflow-Centric Python Client for High-Throughput PubChem Access - Published in JOSS (2025)

SDA — Peer-reviewed • Science 93%

SDA: a symbolic differential algebra package in C++ - Published in JOSS (2025)

voice — Peer-reviewed • Science 93%

voice: A Comprehensive R Package for Audio Analysis - Published in JOSS (2025)

BayesReconPy — Peer-reviewed • Science 93%

BayesReconPy: A Python package for forecast reconciliation - Published in JOSS (2025)

SOAP — Peer-reviewed • Science 93%

SOAP: A Python Package for Calculating the Properties of Galaxies and Halos Formed in Cosmological Simulations - Published in JOSS (2025)

PolytopeWalk — Peer-reviewed • Science 93%

PolytopeWalk: Sparse MCMC Sampling over Polytopes - Published in JOSS (2025)

The Population Synthesis Toolkit (PST) Python Library — Peer-reviewed • Science 98%

The Population Synthesis Toolkit (PST) Python Library - Published in JOSS (2025)

PyStarshade — Peer-reviewed • Science 93%

PyStarshade: Simulating High-Contrast Imaging of Exoplanets with Starshades - Published in JOSS (2025)

PAAT — Peer-reviewed • Science 93%

PAAT: Physical Activity Analysis Toolbox for the analysis of hip-worn raw accelerometer data in Python - Published in JOSS (2025)

EvoVis — Peer-reviewed • Science 67%

EvoVis: Dashboard for Visualizing Evolutionary Neural Architecture Search Algorithms - Published in JOSS (2025)

ExcelToShiny — Peer-reviewed • Science 93%

ExcelToShiny: An R Package for Automating Shiny Dashboard Creation from Excel Templates - Published in JOSS (2025)

VectoRose — Peer-reviewed • Science 98%

VectoRose: A new package for analysing and visualising 3D non-unit vectors in Python - Published in JOSS (2025)

bisonpicsuite — Peer-reviewed • Science 93%

bisonpicsuite: A set of R packages to estimate wood bison population parameters from remote camera data. - Published in JOSS (2025)

gaia — Peer-reviewed • Science 100%

gaia: An R package to estimate crop yield responses to temperature and precipitation - Published in JOSS (2025)

Lighter — Peer-reviewed • Science 93%

Lighter: Configuration-Driven Deep Learning - Published in JOSS (2025)

3DQLayers — Peer-reviewed • Science 98%

3DQLayers: Volumetric Layer Based Analysis for Quantitative Renal MRI - Published in JOSS (2025)

TurboFlow — Peer-reviewed • Science 93%

TurboFlow: Meanline Modelling of Axial Turbines - Published in JOSS (2025)

PointClouds.jl — Peer-reviewed • Science 96%

PointClouds.jl: Fast & flexible processing of lidar data - Published in JOSS (2025)

dpest — Peer-reviewed • Science 98%

dpest: Streamlining Creation of PEST input files for DSSAT Crop Model Calibration - Published in JOSS (2025)

MEDUSA — Peer-reviewed • Science 93%

MEDUSA: An R tool to model equity and distributional impacts - Published in JOSS (2025)

AutoUncertainties — Peer-reviewed • Science 93%

AutoUncertainties: A Python Package for Uncertainty Propagation - Published in JOSS (2025)

Solar Data Tools — Peer-reviewed • Science 96%

Solar Data Tools: a Python library for automated analysis of unlabeled PV data - Published in JOSS (2025)

medRCT — Peer-reviewed • Science 93%

medRCT: Causal mediation analysis estimating interventional effects mapped to a target trial in R - Published in JOSS (2025)

Syclops — Peer-reviewed • Science 96%

Syclops: A Modular Pipeline for Procedural Generation of Synthetic Data - Published in JOSS (2025)

RiverFlowDynamics v1.0 — Peer-reviewed • Science 92%

RiverFlowDynamics v1.0: A Landlab component for computing two-dimensional river flow dynamics - Published in JOSS (2025)

Mozzie — Peer-reviewed • Science 98%

Mozzie: a computationally efficient simulator for the spatio-temporal modelling of mosquitoes - Published in JOSS (2025)

REMORA — Peer-reviewed • Science 93%

REMORA: Regional Modeling of Oceans Refined Adaptively (built on AMReX) - Published in JOSS (2025)

ICAT — Peer-reviewed • Science 96%

ICAT: The Interactive Corpus Analysis Tool - Published in JOSS (2025)

Giga Connectome — Peer-reviewed • Science 98%

Giga Connectome: a BIDS-app for time series and functional connectome extraction - Published in JOSS (2025)

AI-ANNE — Peer-reviewed • Science 93%

AI-ANNE: (A) (N)eural (N)et for (E)xploration - Published in JOSS (2025)

<code>diverse-seq</code> — Peer-reviewed • Science 93%

<code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences - Published in JOSS (2025)

elfe3D v1.0.1 — Peer-reviewed • Science 93%

elfe3D v1.0.1: Modelling with the total electric field approach using finite elements in 3D - Published in JOSS (2025)

AquaCrop.jl — Peer-reviewed • Science 93%

AquaCrop.jl: A Process-Based Model of Crop Growth - Published in JOSS (2025)

SAnTex — Peer-reviewed • Science 93%

SAnTex: A Python-based Library for Seismic Anisotropy Calculation - Published in JOSS (2025)

MDPSolver — Peer-reviewed • Science 93%

MDPSolver: An Efficient Solver for Markov Decision Processes - Published in JOSS (2025)

EKF_CAL — Peer-reviewed • Science 98%

EKF_CAL: Extended Kalman Filter-based Calibration and Localization - Published in JOSS (2025)

corrp — Peer-reviewed • Science 93%

corrp: An R package for multiple correlation-like analysis and clustering in mixed data - Published in JOSS (2025)

popclass — Peer-reviewed • Science 100%

popclass: A Python Package for Classifying Microlensing Events - Published in JOSS (2025)

remotePARTS — Peer-reviewed • Science 93%

remotePARTS: Spatiotemporal autoregression analyses for large data sets - Published in JOSS (2025)

target-methylseq-qc — Peer-reviewed • Science 98%

target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files. - Published in JOSS (2025)

CUDA-METRO — Peer-reviewed • Science 93%

CUDA-METRO: Parallel Metropolis Monte Carlo for 2D Atomistic Spin Texture Simulation - Published in JOSS (2025)

ez-zarr — Peer-reviewed • Science 98%

ez-zarr: A Python package for easy access and visualisation of OME-Zarr filesets - Published in JOSS (2025)

pooledpeaks — Peer-reviewed • Science 93%

pooledpeaks: Open-Source Fragment Scoring and Analysis Workflow for Population Genetic Analyses of Microsatellite Markers in Pooled Samples - Published in JOSS (2025)

ParquetDB — Peer-reviewed • Science 93%

ParquetDB: A Lightweight Python Parquet-Based Database - Published in JOSS (2025)

AutoEIS — Peer-reviewed • Science 98%

AutoEIS: Automated equivalent circuit modeling from electrochemical impedance spectroscopy data using statistical machine learning - Published in JOSS (2025)

PathSim - A System Simulation Framework — Peer-reviewed • Science 98%

PathSim - A System Simulation Framework - Published in JOSS (2025)

BESMARTS — Peer-reviewed • Science 93%

BESMARTS: A toolkit for data-driven force field design using binary-encoded SMARTS - Published in JOSS (2025)

EXP — Peer-reviewed • Science 98%

EXP: a Python/C++ package for basis function expansion methods in galactic dynamics - Published in JOSS (2025)

Minterpy — Peer-reviewed • Science 93%

Minterpy: multivariate polynomial interpolation in Python - Published in JOSS (2025)

Topography-based surface water modeling in Julia, with support for infiltration and temporal developments — Peer-reviewed • Science 67%

Topography-based surface water modeling in Julia, with support for infiltration and temporal developments - Published in JOSS (2025)

DIFFICE-jax — Peer-reviewed • Science 93%

DIFFICE-jax: Differentiable neural-network solver for data assimilation of ice shelves in JAX - Published in JOSS (2025)

pengWann — Peer-reviewed • Science 98%

pengWann: Descriptors of chemical bonding from Wannier functions - Published in JOSS (2025)

Pydre — Peer-reviewed • Science 100%

Pydre: A Python package for driving simulation data reduction - Published in JOSS (2025)

OPTIMUS — Peer-reviewed • Science 93%

OPTIMUS: A Multidimensional Global Optimization Package - Published in JOSS (2025)

ReadmeReady — Peer-reviewed • Science 93%

ReadmeReady: Free and Customizable Code Documentation with LLMs - A Fine-Tuning Approach - Published in JOSS (2025)

rjaf — Peer-reviewed • Science 95%

rjaf: Regularized Joint Assignment Forest with Treatment Arm Clustering - Published in JOSS (2025)

LongMemory.jl — Peer-reviewed • Science 100%

LongMemory.jl: Generating, Estimating, and Forecasting Long Memory Models in Julia - Published in JOSS (2025)

QuantumACES.jl — Peer-reviewed • Science 98%

QuantumACES.jl: design noise characterisation experiments for quantum computers - Published in JOSS (2025)