GitHub
https://github.com/digital-c-fiber/odmltablesformng
Metadata standard for microneurography data
https://github.com/digital-c-fiber/neuron-c-fiber
Simulation of C-fiber with the simulation environment NEURON
https://github.com/digital-c-fiber/openmnglab
A Python framework for microneurography
https://github.com/digital-chemistry-laboratory/polanyi
Transition state optimization with force fields in Python.
https://github.com/digital-chemistry-laboratory/multiwfn-mac-build
A build recipe for Multiwfn on MacOS
msb1015_assignment3
Repository to keep track of the progress of Msc Systems Biology - MSB1015 2019 Assignment 3
carvalho-bd-virulence
Data sets and code for Carvalho et al. Amphibian Hymenochirus boettgeri as an experimental model for infection studies with the chytrid fungus Batrachochytrium dendrobatidis
https://github.com/digital-chemistry-laboratory/coulson
Python code for Hückel and Pariser-Parr-Pople molecular orbital theory
ppl-cc-ti1-2023-2-g-empresa-de-gestao-financeira
ti-1-ppl-cc-m-20232-empresa-de-gestao-financeira created by GitHub Classroom
fridgesnap
An image-classification Android application developed to generate recipes from user-taken images of food items.
web-site
As Casamenteiras realizam assessoria e cerimonal de casamentos, eventos corporativos e festas em geral.
https://github.com/digital-grinnell/gccb-georgia-dentel-project
GCCB (official Digital-Grinnell) instance of the Georgia Dental Project CollectionBuilder site
image-processing
Repository for Image Processing scripts focused on aiding with quantification of image assays in celular biology research
https://github.com/digital-grinnell/fletx
Examples and test environment for FletX development
ganx
The GitHub repository for the Python package ganX - generate artificially new XRF
fmriprep-denoise-benchmark
Benchmark denoising strategies available from fmriprep.
https://github.com/digital-grinnell/all-things-alma
A place for all things, especially scripts, related to GC's instance of Alma and Primo (and Specto?)
https://github.com/digital-grinnell/streamlit-navigation-template
This is a template project designed as a working starting-point for creation of new, simplified Streamlit multi-page apps. It is rooted in the [Streamlit Part 10: Page Navigation Simplified](https://dev.to/jamesbmour/streamlit-part-10-page-navigation-simplified-55k6) tutorial.
https://github.com/digital-grinnell/cb-file-finder
A copy of my https://github.com/Digital-Grinnell/worksheet-file-finder project stripped down for CollectionBuilder file handling only. NO Alma crud!
https://github.com/digital-grinnell/format-csv-to-excel
A little utility to turn a "formatted" .csv into a meaningful Excel file.
lang-sms
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Skolt Sami language
https://github.com/digital-grinnell/network-file-finder
A Python script desinged to recursively "find" a list of files in network storage.
knowalk
Algorithm that produces embeddings out of a knowledge graph based on biased random walker from user specific weights. The algoritm runs in parallel on multiple cpu, by default n of cpus of the machine -1.
wapiaw3
Public repository for the Personomics Lab's third annual "write a paper in a week" festival!
https://github.com/digital-grinnell/hugo-front-matter-tools
A collection of Python scripts designed to help manage Hugo .md content frontmatter.
wrangling-transcriptomics
A Carpentries-style lesson on transcriptomics, adapted from the wrangling-genomics lesson in the DC/Genomics workshop.
paper-da-ieee-codit-2025
Paper IEEE CoDIT 2025 - Arend/Singh Padda/Schwung - "Online-adaptive PID control using Reinforcement Learning"
k_means_thesis
Computation application for the k-means algorithm is an unsupervised clustering technique that organizes data into clusters based on similarity. It iteratively assigns data points to centroids and recalculates centroids based on the average of assigned points until the variance between points and centroids is minimized.
Speech-Recognition-using-WhisperAI
Multilingual Speech Recognition that uses WhisperAI that can extract words and their timestamps and put them into a .TextGrid file.
ppl-cc-ti1-2023-2-g-timenetflix
ti-1-ppl-cc-m-20232-timenetflix created by GitHub Classroom
golden-agents-notary-network
RDF version of the Notary Network (Notarissennetwerk, https://notarissennetwerk.nl/), a structured version of the Repertorium van Notarissen.
fabulasmitologicas
A collection of Golden Age poems in Spanish in TEI and plain text
thereminq-classiq
ThereminQ CLassiQ - QuantOPS : Orchestrate Qrack, Bonsai, Qimcifa and Tipsy in OpenCL, VCL and CUDA with an X WebUI
rnaseq
nf-core/rnaseq fork; RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
PathFinder: A Matlab/Octave package for oscillatory integration
PathFinder: A Matlab/Octave package for oscillatory integration - Published in JOSS (2025)
NeuroCAPs
NeuroCAPs: A Python Package for Performing Co-Activation Patterns Analyses on Resting-State and Task-Based fMRI Data - Published in JOSS (2025)
ActiSleep Tracker
ActiSleep Tracker: a Python-based dashboard for adjusting automatic sleep predictions of actigraphy data - Published in JOSS (2025)
HINA
HINA: A Learning Analytics Tool for Heterogenous Interaction Network Analysis in Python - Published in JOSS (2025)
PANKH: An unsteady potential flow solver for hovering airfoils
PANKH: An unsteady potential flow solver for hovering airfoils - Published in JOSS (2025)
elasticipy
A python toolkit to perform common tensor operations in Continuum Mechanics
eitprocessing
Software for electrical impedance tomography data loading, visualization and processing
PyMetric: A Geometry Informed Array Mathematics Package
PyMetric: A Geometry Informed Array Mathematics Package - Published in JOSS (2026)
SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging
SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging - Published in JOSS (2026)
pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms
pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms - Published in JOSS (2026)
vkcompviz
Vulkan image and data processing framework capable of running a cascade of compute shaders and displaying or storing the result.
hermes-rheo
Python package designed to complement and extend the piblin library, offering a set of transforms tailored for analysis of rheological data
SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery
SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery - Published in JOSS (2026)
torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch
torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch - Published in JOSS (2026)
https://github.com/spectralmatch/spectralmatch
Relative radiometric normalization toolkit for raster mosaics and time series
FAIRmaterials: Ontology Tools with Data FAIRification in Development
FAIRmaterials: Ontology Tools with Data FAIRification in Development - Published in JOSS (2026)
$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices
$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices - Published in JOSS (2026)
aiida-aimall: A Python package for automating workflows for AIMAll software
aiida-aimall: A Python package for automating workflows for AIMAll software - Published in JOSS (2026)