ndarray-vector-uint8c • Science 44%

Create a clamped unsigned 8-bit integer vector (i.e., a one-dimensional ndarray).

marketmoodring • Science 44%

Python implementation for regime-dependent portfolio optimization

https://github.com/jageo/testbinder • Science 13%

Test for Binder

prog2_ybel_calculator • Science 44%

Student Support Code for 'Calculator' Task

nagios-plugin-python-templates • Science 44%

A set of templates for Nagios check scripts written in Python.

https://github.com/denajgibbon/gibbonr-tutorial • Science 13%

pttools-gw • Science 54%

Simulation software for phase transitions in the early universe

gmail-archiver • Science 44%

Locally archive Gmail emails.

hetionet-analysis • Science 75%

Various data analysis performed using Hetionet, a hetnet of biomedical knowledge.

stage-discharge_cannon-welch • Science 67%

River stage and discharge for the Cannon River at Welch, Minnesota, along with double-Manning rating curve

rao-blackwellized-slam-smoothing • Science 67%

Codes for "Rao-Blackwellized particle smoothing for simultaneous localization and mapping"

https://github.com/denajgibbon/automated-detection-repository • Science 13%

wakis • Science 67%

3D electromagnetic time-domain solver, specialized in wake potential and beam-coupling impedance computation for particle accelerators

hate-speech-detection • Science 54%

Developed a hate speech detection model using PyTorch. Applied natural language processing techniques and deep learning algorithms to identify and classify offensive language. Achieved high accuracy in detecting hate speech, contributing to the development of more inclusive online communities.

https://github.com/jageo/jageo • Science 36%

https://github.com/denajgibbon/transfer-learning-open-data • Science 13%

serial-communication-gui-program • Science 44%

stats-array-max-by • Science 44%

Calculate the maximum value of an array via a callback function.

beatmonitor • Science 67%

Naturalistic measurement of multi-person cardiac activity using open source smartwatch technology

mastersthesis • Science 44%

Files and programs used in the data manipulation for my thesis

enac-it4r-repo • Science 52%

Template with licences / github templates and contributing processes

open-grip-force • Science 52%

Open Grip Force Sensor for MRI

docassemble-smpdecisiontree • Science 44%

alexstormwood • Science 44%

Github profile decor.

co2-emissions-ml • Science 44%

assortedrfunctions • Science 54%

This is just a random collection of functions for R

dst_classification • Science 44%

yolo_test2 • Science 54%

openspace-rvdata • Science 67%

Python library to generate assets for OpenSpace from rvdata.us.

my-yolov8 • Science 54%

celestia-bedrock-manta • Science 44%

simplex • Science 44%

Продукт выпускной квалификационной работы

constants-float32-fourth-root-eps • Science 44%

Fourth root of single-precision floating-point epsilon.

https://github.com/denajgibbon/gibbon-feature-comparison • Science 13%

thermo_gnn • Science 57%

rcoins • Science 67%

Identify continuous lines in a network

@hugoalh/string-dissect • Science 44%

An ECMAScript (JavaScript & TypeScript) module to dissect the string; Safe with the emojis, URLs, and words.

gitlab-novice • Science 44%

An Introduction to Git and GitLab

learning-complexity-gradually • Science 54%

Repository of the paper "Learning complexity gradually in quantum machine learning models"

slurmfun • Science 44%

MATLAB tools to submit jobs into SLURM

molekuele-und-festkoerper • Science 75%

Lecture notes on molecular and solid state physics (german)

opbnb • Science 54%

bowtie • Science 67%

Bow-tie analysis for the energy channels of a generic particle instrument

core • Science 46%

A REST API and other components for the Pixlise project, supporting the Pixlise UI.

hompa • Science 54%

A Python package including an algorithm that considers employer, employee demographic and social factors, and employee preferences to determine the ideal proportion of home office work for efficiency and resource-saving.

lab-website • Science 44%

test-actions • Science 44%

uselecdata • Science 44%

mdsd3 • Science 44%

basicsr • Science 54%

https://github.com/jageo/fakecalculator • Science 13%

Some class for testing code

projetoti2-receitasfaceis • Science 44%

2025-06-03-ncl • Science 44%

Unix Shell

plf • Science 49%

Peptide location fingerprinting (PLF) is a technique capable of identifying modified proteins and potential causal mechanisms in complex biological samples. Protein Locational Fingerprinter determines statisticaly significant peptide yields from protein functional domains.

cod_sr • Science 54%

COD_SR

workshop-computational-reproducibility • Science 67%

Material for the workshop 'Best Practices for Writing Reproducible Code'

mmdetection • Science 44%

ph-meter-interface • Science 44%

lsdb • Science 67%

LSDB - python tool for scalable analysis of large catalogs

vcfpcroffset • Science 67%

Tests mutations in a vcf file for unbalanced PCR templates

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis • Science 87%

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization • Science 87%

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library • Science 87%

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library - Published in JOSS (2026)

A Python API for OTTER • Science 87%

A Python API for OTTER - Published in JOSS (2026)

c3dr • Science 67%

Read and write C3D motion capture data in R

rydiqule • Science 75%

Rydberg Sensor Interactive Quantum Physics Module

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles • Science 87%

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles - Published in JOSS (2026)

Dyad: a binary-star dynamics and statistics library for Python • Science 87%

Dyad: a binary-star dynamics and statistics library for Python - Published in JOSS (2026)

pyfive: A pure-Python HDF5 reader • Science 92%

pyfive: A pure-Python HDF5 reader - Published in JOSS (2026)

r.earthworks • Science 67%

An add-on tool for computational terrain modeling in GRASS

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows • Science 87%

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows - Published in JOSS (2026)

regularizedoptimization.jl • Science 67%

Algorithms for regularized optimization

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali • Science 87%

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali - Published in JOSS (2026)

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. • Science 92%

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. - Published in JOSS (2026)

KinOpt: A Python package for chemical kinetics analysis and optimization • Science 87%

KinOpt: A Python package for chemical kinetics analysis and optimization - Published in JOSS (2026)

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia • Science 87%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia - Published in JOSS (2026)

tangram, an open platform for modular, real-time air traffic management research • Science 96%

tangram, an open platform for modular, real-time air traffic management research - Published in JOSS (2025)

powerfactory-tools • Science 75%

A Python toolbox for the (external) control of DIgSILENT PowerFactory.

rmcmc • Science 57%

Robust Markov chain Monte Carlo methods in R

datatidy24sta5069z • Science 44%

Tidy data for analysis for STA5069Z course

xr_fresh: Automated Time Series Feature Extraction for Remote Sensing & Gridded Data • Science 93%

xr_fresh: Automated Time Series Feature Extraction for Remote Sensing & Gridded Data - Published in JOSS (2025)

SpectralUnmixing • Science 44%

Spectral unmixing, oriented towards imaging spectroscopy data. Lots of flavors included.

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control • Science 87%

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control - Published in JOSS (2025)

MatrixBandwidth • Science 44%

Fast algorithms for matrix bandwidth minimization and matrix bandwidth recognition in Julia.

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination • Science 87%

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination - Published in JOSS (2025)

molify: Molecular Structure Interface • Science 87%

molify: Molecular Structure Interface - Published in JOSS (2025)

dispersiveshallowwater.jl • Science 67%

A Julia library of structure-preserving numerical methods for dispersive wave equations

grepq — Peer-reviewed • Science 98%

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions - Published in JOSS (2025)

gibbonNetR — Peer-reviewed • Science 93%

gibbonNetR: an R Package for the Use of Convolutional Neural Networks for Automated Detection of Acoustic Data - Published in JOSS (2025)

gtexr — Peer-reviewed • Science 98%

gtexr: A convenient R interface to the Genotype-Tissue Expression (GTEx) Portal API - Published in JOSS (2025)

gtk-fortran — Peer-reviewed • Science 54%

gtk-fortran: a GTK+ binding to build Graphical User Interfaces in Fortran - Published in JOSS (2019)

portalcasting — Peer-reviewed • Science 59%

portalcasting: Supporting automated forecasting of rodent populations - Published in JOSS (2022)

Unishox — Peer-reviewed • Science 98%

Unishox: A hybrid encoder for Short Unicode Strings - Published in JOSS (2022)

dataaimsr — Peer-reviewed • Science 93%

dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform - Published in JOSS (2021)

chirps — Peer-reviewed • Science 93%

chirps: API Client for the CHIRPS Precipitation Data in R - Published in JOSS (2020)

iheatmapr — Peer-reviewed • Science 95%

iheatmapr: Interactive complex heatmaps in R - Published in JOSS (2017)

rnassqs — Peer-reviewed • Science 95%

rnassqs: An R package to access agricultural data via the USDA National Agricultural Statistics Service (USDA-NASS) 'Quick Stats' API - Published in JOSS (2019)

rtweet — Peer-reviewed • Science 46%

rtweet: Collecting and analyzing Twitter data - Published in JOSS (2019)

containerit — Peer-reviewed • Science 95%

containerit: Generating Dockerfiles for reproducible research with R - Published in JOSS (2019)

mitolina — Peer-reviewed • Science 93%

mitolina: MITOchondrial LINeage Analysis - Published in JOSS (2019)