graphlayouts
graphlayouts: Layout algorithms for network visualizations in R - Published in JOSS (2023)
Netwulf
Netwulf: Interactive visualization of networks in Python - Published in JOSS (2019)
chise
A web application to visualize and edit the pathway models represented by SBGN Process Description Notation
cytoscape-expand-collapse
A Cytoscape.js extension to expand/collapse nodes for better management of complexity of compound graphs
cytoscape.js-undo-redo
A Cytoscape.js extension to provide an undo-redo framework
cytoscape-view-utilities
A Cytoscape.js extension to provide miscellenaous view utilities such as hiding and highlighting nodes/edges
pathway-mapper
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
cytoscape-node-editing
A Cytoscape.js extension to provide grapples to resize nodes
cytoscape-context-menus
A Cytoscape.js extension to provide context menu around elements and core instance
cytoscape-autopan-on-drag
A Cytsocape.js extension to automatically pan when nodes are out of canvas bounds
vosviewer-online
VOSviewer Online is a tool for network visualization. It is a web-based version of VOSviewer, a popular tool for constructing and visualizing bibliometric networks.
cytoscape-edge-editing
A Cytoscape.js extension enabling interactive editing of edge anchor (bend or control) points
cytoscape-grid-guide
A Cytsocape.js extension to provide a framework for grid interactions such as grid lines and snapping to grid, and guidelines and snap support for alignment of nodes.