seaborn
seaborn: statistical data visualization - Published in JOSS (2021)
Hypothesis
Hypothesis: A new approach to property-based testing - Published in JOSS (2019)
Pooch
Pooch: A friend to fetch your data files - Published in JOSS (2020)
lifelines
lifelines: survival analysis in Python - Published in JOSS (2019)
ArviZ a unified library for exploratory analysis of Bayesian models in Python
ArviZ a unified library for exploratory analysis of Bayesian models in Python - Published in JOSS (2019)
Intracranial Electrode Location and Analysis in MNE-Python
Intracranial Electrode Location and Analysis in MNE-Python - Published in JOSS (2022)
OSMnx
OSMnx: A Python package to work with graph-theoretic OpenStreetMap street networks - Published in JOSS (2017)
SunPy
SunPy: A Python package for Solar Physics - Published in JOSS (2020)
BlenderProc2
BlenderProc2: A Procedural Pipeline for Photorealistic Rendering - Published in JOSS (2023)
SALib
SALib: An open-source Python library for Sensitivity Analysis - Published in JOSS (2017)
xclim
xclim: xarray-based climate data analytics - Published in JOSS (2023)
sourmash v4
sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets - Published in JOSS (2024)
imodels
imodels: a python package for fitting interpretable models - Published in JOSS (2021)
SpiceyPy
SpiceyPy: a Pythonic Wrapper for the SPICE Toolkit - Published in JOSS (2020)
scikit-fem
scikit-fem: A Python package for finite element assembly - Published in JOSS (2020)
alchemlyb
alchemlyb: the simple alchemistry library - Published in JOSS (2024)
Catalyst
Catalyst: a Python JIT compiler for auto-differentiable hybrid quantum programs - Published in JOSS (2024)
pyhf
pyhf: pure-Python implementation of HistFactory statistical models - Published in JOSS (2021)
Pubmed Parser
Pubmed Parser: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset XML Dataset - Published in JOSS (2020)
automata
automata: A Python package for simulating and manipulating automata - Published in JOSS (2023)
ChemPy
ChemPy: A package useful for chemistry written in Python - Published in JOSS (2018)
TorchGAN
TorchGAN: A Flexible Framework for GAN Training and Evaluation - Published in JOSS (2021)
khmer release v2.1
khmer release v2.1: software for biological sequence analysis - Published in JOSS (2017)
HyperNetX
HyperNetX: A Python package for modeling complex network data as hypergraphs - Published in JOSS (2024)
NiaPy
NiaPy: Python microframework for building nature-inspired algorithms - Published in JOSS (2018)
sectionproperties
sectionproperties: A Python package for the analysis of arbitrary cross-sections using the finite element method - Published in JOSS (2024)
gmr
gmr: Gaussian Mixture Regression - Published in JOSS (2021)
Retriever
Retriever: Data Retrieval Tool - Published in JOSS (2017)
Verde
Verde: Processing and gridding spatial data using Green’s functions - Published in JOSS (2018)
Dynamax
Dynamax: A Python package for probabilistic state space modeling with JAX - Published in JOSS (2025)
pytorch-widedeep
pytorch-widedeep: A flexible package for multimodal deep learning - Published in JOSS (2023)
dit
dit: a Python package for discrete information theory - Published in JOSS (2018)
PoreSpy
PoreSpy: A Python Toolkit for Quantitative Analysis of Porous Media Images - Published in JOSS (2019)
Nashpy
Nashpy: A Python library for the computation of Nash equilibria - Published in JOSS (2018)
atlite
atlite: A Lightweight Python Package for Calculating Renewable Power Potentials and Time Series - Published in JOSS (2021)
Learning from Crowds with Crowd-Kit
Learning from Crowds with Crowd-Kit - Published in JOSS (2024)
Soundata
Soundata: Reproducible use of audio datasets - Published in JOSS (2024)
CMasher
CMasher: Scientific colormaps for making accessible, informative and 'cmashing' plots - Published in JOSS (2020)
open-mastr
open-mastr: A Python Package to Download and Process the German Energy Registry Marktstammdatenregister - Published in JOSS (2024)
eemont
eemont: A Python package that extends Google Earth Engine - Published in JOSS (2021)
opt\_einsum - A Python package for optimizing contraction order for einsum-like expressions
opt\_einsum - A Python package for optimizing contraction order for einsum-like expressions - Published in JOSS (2018)
ReproZip
ReproZip: The Reproducibility Packer - Published in JOSS (2016)
PyAutoLens
PyAutoLens: Open-Source Strong Gravitational Lensing - Published in JOSS (2021)
TextDescriptives
TextDescriptives: A Python package for calculating a large variety of metrics from text - Published in JOSS (2023)
Machine Learning Validation via Rational Dataset Sampling with astartes
Machine Learning Validation via Rational Dataset Sampling with astartes - Published in JOSS (2023)
Pyrodigal
Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes - Published in JOSS (2022)
Physics-Informed Neural networks for Advanced modeling
Physics-Informed Neural networks for Advanced modeling - Published in JOSS (2023)
PyAutoFit
PyAutoFit: A Classy Probabilistic Programming Language for Model Composition and Fitting - Published in JOSS (2021)
ALNS
ALNS: a Python implementation of the adaptive large neighbourhood search metaheuristic - Published in JOSS (2023)
PlatiPy
PlatiPy: Processing Library and Analysis Toolkit for Medical Imaging in Python - Published in JOSS (2023)
small_gicp
small_gicp: Efficient and parallel algorithms for point cloud registration - Published in JOSS (2024)
toqito -- Theory of quantum information toolkit
toqito -- Theory of quantum information toolkit: A Python package for studying quantum information - Published in JOSS (2021)
Calliope
Calliope: a multi-scale energy systems modelling framework - Published in JOSS (2018)
scores
scores: A Python package for verifying and evaluating models and predictions with xarray - Published in JOSS (2024)
torchquad
torchquad: Numerical Integration in Arbitrary Dimensions with PyTorch - Published in JOSS (2021)
HyperCoast
HyperCoast: A Python Package for Visualizing and Analyzing Hyperspectral Data in Coastal Environments - Published in JOSS (2024)
Augmenty
Augmenty: A Python Library for Structured Text Augmentation - Published in JOSS (2024)
PowerAPI
PowerAPI: A Python framework for building software-defined power meters - Published in JOSS (2024)
matador
matador: a Python library for analysing, curating and performing high-throughput density-functional theory calculations - Published in JOSS (2020)
multipers
multipers: Multiparameter Persistence for Machine Learning - Published in JOSS (2024)
Netwulf
Netwulf: Interactive visualization of networks in Python - Published in JOSS (2019)
MNE-ICALabel
MNE-ICALabel: Automatically annotating ICA components with ICLabel in Python - Published in JOSS (2022)
PVGeo
PVGeo: an open-source Python package for geoscientific visualization in VTK and ParaView - Published in JOSS (2019)
The Python Sky Model 3 software
The Python Sky Model 3 software - Published in JOSS (2021)
Easy SimAuto (ESA)
Easy SimAuto (ESA): A Python Package that Simplifies Interacting with PowerWorld Simulator - Published in JOSS (2020)
GNOLL
GNOLL: Efficient Multi-Lingual Software for Real-World Dice Notation and Extensions - Published in JOSS (2023)
pyro
pyro: a framework for hydrodynamics explorations and prototyping - Published in JOSS (2019)
movement_primitives
movement_primitives: Imitation Learning of Cartesian Motion with Movement Primitives - Published in JOSS (2024)
Atramhasis
Atramhasis: An online SKOS vocabulary editor - Published in JOSS (2023)
pentapy
pentapy: A Python toolbox for pentadiagonal linear systems - Published in JOSS (2019)
GWSurrogate
GWSurrogate: A Python package for gravitational wave surrogate models - Published in JOSS (2025)
PyExperimenter
PyExperimenter: Easily distribute experiments and track results - Published in JOSS (2023)
xagg
xagg: A Python package to aggregate gridded data onto polygons - Published in JOSS (2024)
qnm
qnm: A Python package for calculating Kerr quasinormal modes, separation constants, and spherical-spheroidal mixing coefficients - Published in JOSS (2019)
spgrep
spgrep: On-the-fly generator of space-group irreducible representations - Published in JOSS (2023)
fractopo
fractopo: A Python package for fracture network analysis - Published in JOSS (2023)
Monte Carlo / Dynamic Code (MC/DC)
Monte Carlo / Dynamic Code (MC/DC): An accelerated Python package for fully transient neutron transport and rapid methods development - Published in JOSS (2024)
EPyT
EPyT: An EPANET-Python Toolkit for Smart Water Network Simulations - Published in JOSS (2023)
Efficient Polyhedral Gravity Modeling in Modern C++ and Python
Efficient Polyhedral Gravity Modeling in Modern C++ and Python - Published in JOSS (2024)
DSSE
DSSE: An environment for simulation of reinforcement learning-empowered drone swarm maritime search and rescue missions - Published in JOSS (2024)
Spectral Connectivity
Spectral Connectivity: a python package for computing multitaper spectral estimates and frequency-domain brain connectivity measures on the CPU and GPU - Published in JOSS (2022)
Mechkit
Mechkit: A continuum mechanics toolkit in Python - Published in JOSS (2022)
mTRFpy
mTRFpy: A Python package for temporal response function analysis - Published in JOSS (2023)
PyRolL - An Extensible OpenSource Framework for Rolling Simulation
PyRolL - An Extensible OpenSource Framework for Rolling Simulation - Published in JOSS (2024)
ZOSPy
ZOSPy: optical ray tracing in Python through OpticStudio - Published in JOSS (2024)
<code>gollum</code>
<code>gollum</code>: An intuitive programmatic and visual interface for precomputed synthetic spectral model grids - Published in JOSS (2024)