Projects

Scientific Software

Updated 6 months ago

ReferenceSeeker: rapid determination of appropriate reference genomes - Published in JOSS (2020)

ani bioinformatics mash microbiology reference-genomes refseq wgs

Biology (41%)

Scientific Software · Peer-reviewed

Updated 5 months ago

Downloading Genomes from RefSeq

download genomes refseq

Updated 6 months ago

Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy

bash bioinformatics database download genbank genome genomes genomics ncbi refseq sequence

Updated 6 months ago

Pipeline for the selection of canonical proteins for reference proteomes

canonical isoforms msa proteomes refseq uniprot

ecosyste.ms