alphafold alphafold2 archs4 blast databases enrichment-analysis enrichr ensembl genomics gget ncbi proteomics reference rna-seq transcriptomics uniprot

citation-analysis citation-counts citation-downloader citations command-line-tool google-scholar google-search library literature-review literature-search ncbi nih-citation-data pmid pubmed snowballing

bioconda ensembl genome ncbi python ucsc

Engineering (40%)

bioinformatics biology command-line download-genomes genbank genomics ncbi python

bioinformatics computational-biology genbank genomics ncbi python sequencing

Biology

lineage ncbi ncbi-taxonomy pandas python taxdump taxonomy

bioinformatics genomics ncbi

azure bioinformatics conda docker genbank genetics liftoff metadata mpox ncbi nextflow nf-tower pipeline python rna-seq scicomp sequencing singularity sra vadr

biodiversity biodiversity-data ivado ncbi ncbi-taxonomy taxonomy verena

bioinformatics blast ncbi

bash bioinformatics database download genbank genome genomes genomics ncbi refseq sequence

bioinformatics biological-sequences ncbi sequences transcripts

automation download ncbi reads sra

bash bwa fastqc fisheries genomics ncbi norway plink r trimmomatic usa vcftools