git-quick-stats
▁▅▆▃▅ Git quick statistics is a simple and efficient way to access various statistics in git repository.
jouleit
A repository of scripts that can be used to monitor energy consumption.
ghost-ssg
A Docker-based pipeline to publish the content of a local Ghost 4 server as static pages.
bash-colour-include
A script to create and export a set of variables which contain the 8 basic colours that can be displayed on most terminals.
bkahlert/bats-wrapper
Self-contained wrapper to run tests based on the Bash testing framework Bats
clean_backup
A repository to generate automated backups for the Neotoma PostgreSQL database using AWS infrastructure
https://github.com/av/harbor
Effortlessly run LLM backends, APIs, frontends, and services with one command.
https://github.com/crowdstrike/falcon-scripts
Scripts to streamline the deployment and use of the CrowdStrike Falcon sensor
https://github.com/anselmoo/bashplot
Instant data plotting from the terminal into the terminal
https://github.com/cicirello/alpine-plus-plus
A lightweight Docker container for shell scripting with git and GNU tools on Alpine Linux
https://github.com/cicirello/gnu-on-alpine
A lightweight Docker container for shell scripting with GNU tools on Alpine Linux
https://github.com/cdpxe/nefias
Network Forensic & Anomaly Detection System; tailored for covert channel/network steganography detection
https://github.com/agoose77/git-gone
Publish local commits or changes for all shell-visited git repositories
https://github.com/devidw/hashnode-gh-src-new
Bash Script to automatically create new hashnode .md article files with frontmatter
https://github.com/anibulus/basics-shellbash
https://github.com/kalilamali/fishdna_pipeline
Step-by-step approach in the analysis of Rainbow trout DNA from raw reads to population insights using fastqc, trimmomatic, bwa, vcftools, plink, and R.
2022-01-18-cardiff-online
Shell, Git, Plotting and Programming in Python (Cardiff, January 2022)
bash-flock-wrapper
A bash script skeleton for creating scripts that can only run one instances at any given time by using flock.
https://github.com/copyleftdev/shellbot
ShellBot is a vibrant CLI tool that leverages OpenAI's cutting-edge AI to provide expert guidance on computer science, cloud computing, and Linux systems. Designed for tech enthusiasts and IT professionals alike, ShellBot answers your queries, troubleshoots issues, and shares best practices—all with a splash of color for enhanced readability
rnaseq_pipeline
RNA-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
phredsort
`phredsort` is a cli tool for sorting sequences in a FASTQ file by their quality scores
https://github.com/asadprodhan/how-to-run-kraken2-on-hpc-using-singularity-container-and-nextflow
An intuitive tutorial on Kraken2 metagenomic analysis
https://github.com/cimentadaj/unix_workbench_answers
Answers to the book 'The Unix Workbench'
https://github.com/cloud-span/foundation-01-intro
Cloud SPAN Foundation Course - Intro
https://github.com/csbg/bioinformaticspracticals1
Student resources for UE Bioinformatische Übungen I
https://github.com/csiro-data-school/revision-activities-cmd-line-and-git
Morning revision activities for Ag&Food Data School week 1, intro to command lines & Git
os-detect
A script for working out what OS you are running on as some scripts need to be OS aware.
shapespyer
The project provides Python tool-chain and shell scripts for molecular simulation workflows: preparation, running and analysing molecular dynamics (MD) simulations of bio- and organic soft condensed matter.
https://github.com/darixsamani/mongodb-school
Le but de ce travail est d’écrire un ensemble de requête complexe sur MongoDb pour répondre a un besoin de gestion des étudiants dans un environnement universitaire
draw-lines
A bash script that allows you to draw multiple different types of lines on the console.
bash-course
Material for the advanced bash scripting course at Heidelberg University
bash-colour-testcard
A script to display a table of colours based on the number of colours that your terminal is able to support.
bkahlert/recordr
Recordr is an automated terminal session recorder and SVG converter
https://github.com/adamouization/dotfiles
:wrench: Dotfiles to increase command line workflow across machines.
atacseq_pipeline
Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
floss-toolbox
A toolbox to help developers and open source referents to not waste their time with manual and boring tasks. Provides simple and light tools to make investigations in source code to look for hot data. Provides also primitives to manage GitHub and GitLab organizations.
2021-07-27-reading-r-git-bash
Workshop website for UoR Carpentries July 2021 (R+Git+Bash).
2018-03-20-dundee
Software Carpentry Workshop site repository for Dundee workshop, 20-21/3/2018
sixarm_bash_shellshock
SixArm.com » Bash » Shellshock security testing and patching
https://github.com/cbouy/m2-chemoinformatics
Scripts I used during my Master in Chemoinformatics in Strasbourg
