Data

Tools

Indexes

Applications

Experiments

Open Source Science

Medicine

Life Sciences

Field Statistics

Total Projects: 40
Average Confidence: 63%

High Confidence (≥70%): 18
Medium Confidence (50-70%): 4
Low Confidence (<50%): 18

Field Keywords:
clinical disease patient treatment diagnosis epidemiology drug therapy health medical surgery cancer diabetes cardiovascular infectious vaccine antibiotic symptom prognosis biomarker
Common Packages:
lifelines nilearn mne dipy nipype
Scientific Indicators:
cohort trial outcome survival risk
Top Keywords from Projects
python (10) eeg (5) neuroscience (5) machine-learning (4) neuroimaging (4) meg (3) simulation (3) r (3) rstats (3) bayesian-inference (2) magnetoencephalography (2) electroencephalography (2) statistics (2) signal-processing (2) mne (2) r-package (2) network-analysis (1) workflow-engine (1) actuarial-science (1) churn-prediction (1)
Related Fields

Projects in Medicine (40)

Intracranial Electrode Location and Analysis in MNE-Python 92% confidence

Intracranial Electrode Location and Analysis in MNE-Python - Published in JOSS (2022)

ecog eeg electrocorticography electroencephalography machine-learning magnetoencephalography meg neuroimaging neuroscience python +2 more
Also in: Economics
Match signals: packages: 92%
Science Score
100%
fRAT 88% confidence

fRAT: an interactive, Python-based tool for region-of-interest summaries of functional imaging data - Published in JOSS (2023)

brain-imaging fmri fmri-preprocessing fmri-roi-analysis neuroimaging python
Also in: Sociology, Mathematics
Match signals: packages: 88%
Science Score
100%
fMRIStroke 88% confidence

fMRIStroke: A preprocessing pipeline for fMRI Data from Stroke patients - Published in JOSS (2024)

Also in: Economics, Sociology
Match signals: packages: 88%
Science Score
93%
MNE-BIDS 88% confidence

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis - Published in JOSS (2019)

bids eeg electroencephalography ieeg magnetoencephalography meg mne neuroimaging neuroscience
Also in: Mathematics
Match signals: packages: 88%
Science Score
100%
xcp_d 88% confidence

Post-processing of fMRIPrep, NiBabies, and HCP outputs

Also in: Sociology, Mathematics
Match signals: packages: 88%
Science Score
67%
PyBispectra 84% confidence

PyBispectra: A toolbox for advanced electrophysiological signal processing using the bispectrum - Published in JOSS (2025)

amplitude-amplitude-coupling bicoherence bispectrum connectivity cross-frequency-coupling hpmax neuroscience non-sinusoidal phase-amplitude-coupling phase-phase-coupling +8 more
Also in: Neuroscience, Mathematics
Match signals: packages: 84%
Science Score
98%
MNE-LSL 84% confidence

MNE-LSL: Real-time framework integrated with MNE-Python for online neuroscience research through LSL-compatible devices. - Published in JOSS (2025)

brain brain-computer-interfaces labstreaminglayer lsl network neuroimaging neuroscience real-time visualisation
Also in: Mathematics
Match signals: packages: 84%
Science Score
100%
Giga Connectome 84% confidence

Giga Connectome: a BIDS-app for time series and functional connectome extraction - Published in JOSS (2025)

Also in: Mathematics, Artificial Intelligence and Machine Learning
Match signals: packages: 84%
Science Score
98%
SleepECG 84% confidence

SleepECG: a Python package for sleep staging based on heart rate - Published in JOSS (2023)

ecg heartrate peak-detection python sleep-staging
Also in: Neuroscience, Mathematics
Match signals: packages: 84%
Science Score
93%
Frites 84% confidence

Frites: A Python package for functional connectivity analysis and group-level statistics of neurophysiological data - Published in JOSS (2022)

brainhack brainhack-marseille brainweb cluster-based electrophysiological-data ffx functional-connectivity gaussian-copula group-level information-theory +4 more
Also in: Earth and Environmental Sciences
Match signals: packages: 84%
Science Score
100%
MNELAB 84% confidence

MNELAB: a graphical user interface for MNE-Python - Published in JOSS (2022)

eeg gui meg mne python
Also in: Mathematics
Match signals: packages: 84%
Science Score
95%
MNE-ICALabel 84% confidence

MNE-ICALabel: Automatically annotating ICA components with ICLabel in Python - Published in JOSS (2022)

eeg ica neuroscience python
Also in: Mathematics
Match signals: packages: 84%
Science Score
98%
Octopus Sensing 84% confidence

Octopus Sensing: A Python library for human behavior studies - Published in JOSS (2022)

eeg experience-scenarios gsr ppg questionnaire shimmer
Also in: Mathematics
Match signals: packages: 84%
Science Score
95%
FURY 84% confidence

FURY: advanced scientific visualization - Published in JOSS (2021)

3d-graphics game-engine hacktoberfest python scientific-visualization scriptable-animations shaders simulation
Also in: Neuroscience, Mathematics
Match signals: packages: 84%
Science Score
95%
pd-parser 84% confidence

pd-parser: A tool for Matching Photodiode Deflection Events to Time-Stamped Events - Published in JOSS (2020)

Also in: Neuroscience, Mathematics
Match signals: packages: 84%
Science Score
93%
NeuroDSP 84% confidence

NeuroDSP: A package for neural digital signal processing - Published in JOSS (2019)

Also in: Mathematics
Match signals: packages: 84%
Science Score
100%
AtlasReader 84% confidence

AtlasReader: A Python package to generate coordinate tables, region labels, and informative figures from statistical MRI images - Published in JOSS (2019)

Also in: Artificial Intelligence and Machine Learning
Match signals: packages: 84%
Science Score
100%
QUIT 84% confidence

QUIT: QUantitative Imaging Tools - Published in JOSS (2018)

Also in: Neuroscience
Match signals: packages: 84%
Science Score
95%
SurPyval 63% confidence

SurPyval: Survival Analysis with Python - Published in JOSS (2021)

actuarial-science churn-prediction non-parametric parametric-distribution parametric-methods probability-plot reliability reliability-analysis reliability-engineering risk-analysis +2 more
Also in: Earth and Environmental Sciences, Engineering
Match signals: packages: 84% indicators: 20%
Science Score
93%
MiTfAT 63% confidence

MiTfAT: A Python-based Analysis Tool for Molecular fMRI Experiments. - Published in JOSS (2021)

computational-neuroscience fmri-analysis machine-learning python time-series-analysis
Also in: Mathematics
Match signals: packages: 84% indicators: 20%
Science Score
100%
FIPS 60% confidence

FIPS: An R Package for Biomathematical Modelling of Human Fatigue Related Impairment - Published in JOSS (2020)

biomathematics fatigue human-factors modeling r rstats simulation
Also in: Earth and Environmental Sciences, Artificial Intelligence and Machine Learning
Match signals: indicators: 60%
Science Score
95%
dia 60% confidence

dia: An R package for the National Oceanic and Atmospheric Administration dam impact analysis - Published in JOSS (2025)

dam-impact-analysis dams fish r-packages salmon simulation
Also in: Artificial Intelligence and Machine Learning
Match signals: indicators: 60%
Science Score
95%
coder 45% confidence

coder: An R package for code-based item classification and categorization - Published in JOSS (2020)

classification icd-10 package r r-package rstats
Also in: Materials Science
Match signals: readme: 40% indicators: 60%
Science Score
93%
PyMSM 45% confidence

PyMSM: Python package for Competing Risks and Multi-State models for Survival Data - Published in JOSS (2022)

Also in: Engineering, Artificial Intelligence and Machine Learning
Match signals: readme: 20% packages: 84% indicators: 40%
Science Score
98%
Fitting a Gamma-Gompertz survival model to capture-recapture data collected on free-ranging animal populations 40% confidence

Fitting a Gamma-Gompertz survival model to capture-recapture data collected on free-ranging animal populations - Published in JOSS (2018)

bayesian-inference capture-recapture data-cloning individual-heterogeneity maximum-likelihood-estimation mcmc survival
Also in: Earth and Environmental Sciences, Artificial Intelligence and Machine Learning
Match signals: indicators: 40%
Science Score
95%
NEMSEER 40% confidence

NEMSEER: A Python package for downloading and handling historical National Electricity Market forecast data produced by the Australian Energy Market Operator - Published in JOSS (2023)

aemo australia energy forecast national-electricity-market nem nemweb pasa pre-dispatch python
Also in: Earth and Environmental Sciences, Artificial Intelligence and Machine Learning
Match signals: indicators: 40%
Science Score
100%
Mozzie 40% confidence

Mozzie: a computationally efficient simulator for the spatio-temporal modelling of mosquitoes - Published in JOSS (2025)

Also in: Materials Science, Agricultural and Biological Sciences
Match signals: indicators: 40%
Science Score
98%
ExpFamilyPCA.jl 40% confidence

ExpFamilyPCA.jl: A Julia Package for Exponential Family Principal Component Analysis - Published in JOSS (2025)

compression compression-algorithm denoising dimensionality-reduction epca exponential-family interpretability julia machine-learning pca +3 more
Match signals: indicators: 40%
Science Score
100%
RxInfer 40% confidence

RxInfer: A Julia package for reactive real-time Bayesian inference - Published in JOSS (2023)

bayesian-inference inference-engine julia-language machine-learning message-passing probabilistic-programming variational-inference
Match signals: indicators: 40%
Science Score
77%
shinyssd v1.0 40% confidence

shinyssd v1.0: Species Sensitivity Distributions for Ecotoxicological Risk Assessment - Published in JOSS (2019)

ecotoxicology r rstats shiny shinyapps species-sensitivity-distribution ssd-curves
Match signals: indicators: 40%
Science Score
67%
samsim 40% confidence

Also in: Economics, Sociology
Match signals: indicators: 40%
Science Score
44%
netrankr 40% confidence

netrankr: An R package for total, partial, and probabilistic rankings in networks - Published in JOSS (2022)

network-analysis network-centrality r-package
Also in: Psychology
Match signals: indicators: 40%
Science Score
100%
tipr 40% confidence

tipr: An R package for sensitivity analyses for unmeasured confounders - Published in JOSS (2022)

Also in: Earth and Environmental Sciences, Engineering
Match signals: indicators: 40%
Science Score
49%
ElGateau 40% confidence

ElGateau: A Library for Using the Elgato Stream Deck for Experimental Psychology Research - Published in JOSS (2018)

Match signals: indicators: 40%
Science Score
93%
alpaca_eval 40% confidence

DPO evaluation

Also in: Biology
Match signals: indicators: 40%
Science Score
36%
funsies 40% confidence

funsies: A minimalist, distributed and dynamic workflow engine - Published in JOSS (2021)

automation data-engineering data-ops hashtree infrastructure python redis workflow-engine
Match signals: indicators: 40%
Science Score
98%
StochasticDominance.jl 40% confidence

StochasticDominance.jl: A Julia Package for Higher Order Stochastic Dominance - Published in JOSS (2025)

Match signals: indicators: 40%
Science Score
36%
splithalf 40% confidence

splithalf: robust estimates of split half reliability - Published in JOSS (2021)

Also in: Neuroscience, Artificial Intelligence and Machine Learning
Match signals: indicators: 40%
Science Score
95%
presize 40% confidence

presize: An R-package for precision-based sample size calculation in clinical research - Published in JOSS (2021)

confidence-intervals precision sample-size-calculation shiny-app
Match signals: indicators: 40%
Science Score
93%
CoPro 40% confidence

CoPro: a data-driven modelling framework for conflict risk projections - Published in JOSS (2021)

climate conflict environment projection risk security
Also in: Artificial Intelligence and Machine Learning
Match signals: indicators: 40%
Science Score
98%