miassembler • Science 65%

jsdm-pollinators-flanders • Science 44%

cessda.cmv.core • Science 44%

CESSDA Metadata Validator core. Contains business logic of all use cases.

porthamiltonianmodelreduction.jl • Science 44%

Model reduction for port-Hamiltonian and passive systems in Julia

bakaano-hydro • Science 67%

A distributed hydrology-guided neural network model for streamflow prediction

pyrte-rrtmgp • Science 67%

Python interface to the RTE+RRTMGP Fortran software package

pydeepinsight • Science 67%

A python implementation of the DeepInsight methodology.

flynncoo.github.io • Science 44%

Code for personal website.

realisticseismology • Science 44%

An implementation of realistic, finite-temperature nuclear-matter models in neutron-star seismology.

archive_news_cc • Science 57%

Closed Caption Transcripts of News Videos from archive.org 2014--2023

seminar_pqos_and_v2x • Science 44%

In Seminar paper I am working on finding the predictive Quality of Service for Autonomous Systems.

yolo • Science 54%

momentmatching.jl • Science 44%

This is a package to estimate parameters of macroeconomic models by moment matching methods, such as GMM or SMM.

2024-2025 • Science 67%

The GitHub repository containing all the material related to the Open Science course of the Digital Humanities and Digital Knowledge degree at the University of Bologna (a.a. 2024/2025).

Analytical_RWES • Science 44%

A Python implementation of an analytical expression for the rotor-averaged deficit of a turbine in a non-axisymmetric Gaussian wake

baitcapture • Science 54%

A Nextflow workflow for processing data obtained from targeted resistome bait-capture sequencing

conversational-interface-main- • Science 67%

irp_2024 • Science 44%

gc-gmics • Science 67%

Reduced data and scripts to reproduce the figures in the study of globular clusters using genetically modified galaxy merger histories

lexcube • Science 67%

Lexcube: 3D Data Cube Visualization in Jupyter Notebooks

final-year-project • Science 44%

Chatalyst: React Messaging Application with Integrated AI for Smart Replies.

qsofitmore • Science 67%

QSOFITMORE: a python package for fitting UV-optical spectra of quasars.

doi-service • Science 49%

Service and tools for generating DOIs for PDS bundles, collections, and data sets

moatless-tools • Science 54%

javapta • Science 44%

cjing00923-sunspot_group_detection_yolov5 • Science 44%

transformers_deepseek • Science 54%

ganonymization • Science 67%

A GAN-based Face Anonymization Framework for Preserving Emotional Expressions

detecting_paleoclimate_transitions_with_lerm • Science 49%

Notebooks associated with the "Detecting Paleoclimate Transitions with LERM" paper

amsterdam-diaries-data • Science 44%

Documentation and files for Amsterdam Diaries Time Machine

nsevdx • Science 67%

Modeling Nonstationary Extreme Value Distributions

cerisse • Science 44%

A high-order LES/DNS solver for compressible turbulent reactive flows

ml-generative-energy-design • Science 44%

ML-assisted generative design for energy-efficient buildings

azure • Science 54%

materialui • Science 54%

Qompass AI on MaterialUI: When your React components need material design

radiationpatterns.jl • Science 44%

RadiationPatterns.jl is a Julia package designed for visualizing radiation patterns using PlotlyJS.jl.

pathfinders • Science 54%

Qompass Intern program

dafny-vmc • Science 44%

Dafny-VMC: a Library for Verified Monte Carlo Algorithms

li_2025_arc • Science 75%

deapsea • Science 52%

jacy • Science 44%

The Jacy Japanese Grammar

sesam.jl • Science 44%

Soil Enzyme steady allocation model

img-cond-diffusion-model-ad • Science 54%

object-detection • Science 44%

tlomodel • Science 75%

Epidemiology modelling framework for the Thanzi la Onse project

swigex0 • Science 49%

mgnaturephotos • Science 44%

Photos of nature taken in 2023 and 2024 in rural Rose Hill, Iowa.

ncei.jl • Science 77%

Interface for the National Centers for Environmental Information (NCEI) API

velocityfields.jl • Science 44%

oqtopus-cloud • Science 67%

Open Quantum Toolchain for OPerators & USers (OQTOPUS) is a project that provides the architecture of cloud quantum computers as an open-source software (OSS).

openpdac-13 • Science 67%

grapemr.jl • Science 44%

Gradient Ascent Pulse Engineering

2023-03-13-uwmadison-python • Science 52%

social-media-lab • Science 67%

dts-typescript • Science 44%

Distributed Text Services (DTS) API for the TEI/XML files available in the Kouigenji Monogatari Text DB

rhea-fingerprints • Science 67%

Automatically generate differential reaction fingerprints on reactions in Rhea

irdc-ccsk • Science 65%

Java implementation of distributed reversible computation verification

cvx-package-template • Science 44%

Python package template for cvxpy extensions.

qualo • Science 67%

Qualification Ontology

ocean_intella • Science 54%

Open source software for offshore pipelaying dynamics.

ccbr_tobias • Science 67%

Tobias implementation for ATAC seq data.

plagiator-bch • Science 67%

eit_thigh_force_estimation • Science 44%

This repository contains the work for a master’s thesis focused on predicting force during concentric knee extension using Electrical Impedance (EI) measurements.

sixarm_sencha_demo_model • Science 44%

SixArm.com » Sencha » Demo » Model

training-catalogue • Science 67%

Training catalogue for the ExPaNDS and PaNOSC projects based on ELIXIR's Training Portal TeSS

rangr • Science 49%

Species range dynamics simulation toolset

sparcrna_viz • Science 67%

Single Cell RNA-sequencing differential expression analysis and interactive visualization service on oSparc

nuts • Science 49%

Convert European Regional Data

makerecipes • Science 44%

Makefile recipes

scikit-plots • Science 67%

An intuitive library that seamlessly adds plotting capabilities and functionality to any model objects or outputs, compatible with tools like scikit-learn, XGBoost, TensorFlow, and more.

mat_gemini • Science 54%

Core Matlab scripts for Gemini

incremental_fora • Science 54%

增量学习的多模态FoRA代码，基于YOLOv8

gmimtools • Science 67%

A suite of ground motion intensity measure tools.

sgcv-alp-km-comparison • Science 44%

SGCV ALP KM Comparison

kgem-in-drug-discovery • Science 67%

Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence in the Life Sciences, 2022)

biol827_biological_statistics • Science 44%

Code for BIOL 827 class at UNK.

vepcheck • Science 44%

Nextflow pipeline to check different vep version

xai-kit • Science 44%

A python library developed for AI-related researches used in XAI group.

libthesky • Science 44%

Fortran library to compute positions of celestial bodies

popstar • Science 52%

Phone-Oriented Processing SofTware for ARchives

prealnqc • Science 57%

encode-decode-for-directed-higher-inductive-types • Science 44%

bachelor senior thesis

test-swd3-2025 • Science 54%

https://github.com/jbrea/jbrea.github.io • Science 13%

NOMAD — Peer-reviewed • Science 49%

NOMAD: A distributed web-based platform for managing materials science research data - Published in JOSS (2023)

RelativisticDynamics.jl — Peer-reviewed • Science 93%

RelativisticDynamics.jl: Relativistic Spin-Orbital Dynamics in Julia - Published in JOSS (2023)

brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning — Peer-reviewed • Science 93%

brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning - Published in JOSS (2023)

guitools • Science 44%

Generates taxonomic abundance from bracken report file

https://github.com/jbrea/spikingequilibriumprop • Science 13%

PyBullet Industrial — Peer-reviewed • Science 100%

PyBullet Industrial: A process-aware robot simulation - Published in JOSS (2023)

https://github.com/jbrea/bayesoptbuilder.jl • Science 13%

https://github.com/jbrea/planningvscompensatorycaching.jl • Science 23%

MultilayerGraphs.jl — Peer-reviewed • Science 98%

MultilayerGraphs.jl: Multilayer Network Science in Julia - Published in JOSS (2023)

https://github.com/jbrea/symmetrysaddles.jl • Science 23%

histoc — Peer-reviewed • Science 93%

histoc: Histocompatibility analysis performed by kidney allocation systems - Published in JOSS (2022)

btllib — Peer-reviewed • Science 98%

btllib: A C++ library with Python interface for efficient genomic sequence processing - Published in JOSS (2022)

GHEtool — Peer-reviewed • Science 98%

GHEtool: An open-source tool for borefield sizing in Python - Published in JOSS (2022)

Accelerating Parallel Operation for Compacting Selected Elements on GPUs — Peer-reviewed • Science 95%

Accelerating Parallel Operation for Compacting Selected Elements on GPUs - Published in JOSS (2022)

NeuralFieldEq.jl — Peer-reviewed • Science 93%

NeuralFieldEq.jl: A flexible solver to compute Neural Field Equations in several scenarios - Published in JOSS (2022)

https://github.com/erictleung/poofsi • Science 23%

:zap: Learn concepts from Nature Methods' series "Points of Significance"