GitHub
https://github.com/bytedance/pxdesignbench
A Unified Evaluation Suite for Protein Design
https://github.com/bytedance/hammer
An efficient toolkit for training deep models.
https://github.com/byuflowlab/implicitad.jl
Automates steady and unsteady adjoints (general solvers and ODEs respectively). Forward and reverse mode algorithmic differentiation around implicit functions (not propagating AD through), as well as custom rules to allow for mixed-mode AD or calling external (non-AD compatible) functions within an AD chain.
https://github.com/cadet/rdm-example-rectangular-pulse
CADET case study from paper: Analytical solutions and moment analysis of general rate model for linear liquid chromatography” (Shamsul Qamar et al.)
https://github.com/cadet/rdm-example-multi-state-steric-mass-action
CADET case study from paper: Multi-state steric mass action model and case study on complex high loading behavior of mAb on ion exchange tentacle resin (Diedrich et al.)
https://github.com/cafferychen777/awesome-scrna-annotation
A curated list of tools and methods for scRNA-seq cell type annotation
https://github.com/calliope-project/module_road_transport
A module to compute road transport timeseries and yearly values.
https://github.com/caltechlibrary/2018-03-29-r-workshop
Repo for files for 2018-03-29 Data Analysis, Visualization, and Reproducibility with R Notebooks workshop.
https://github.com/cambiotraining/stats-mixed-effects-models
https://github.com/camilogarciabotero/biosimplex.jl
Representing BioSequences as Simplex numerical matrix
https://github.com/captaincodercool/captaincodercool
Welcome to CAPTAINCODERCOOL’s GitHub! Dive into my repository of diverse projects ranging from AI-driven tools to full-stack web applications. Discover code, insights, and innovations crafted to push the boundaries of technology and software development.
https://github.com/carmonalab/genenmf
Methods to discover gene programs on single-cell data
https://github.com/carmonalab/stacas
R package for semi-supervised single-cell data integration
https://github.com/carperai/trlx
A repo for distributed training of language models with Reinforcement Learning via Human Feedback (RLHF)
https://github.com/carv-ics-forth/hpk
HPK allows running Kubernetes applications within HPC by translating deployments to Slurm and Singularity/Apptainer
https://github.com/casus/umod
Urine Microscopy Open Dataset and its validation
https://github.com/catalyst-cooperative/open-grid-emissions
Tools for producing high-quality hourly generation and emissions data for U.S. electric grids
https://github.com/cbg-ethz/oncotreevis
An interactive graphical user interface for visualizing mutation tree cohorts.
https://github.com/cdk/cdkbook
Groovy Cheminformatics with the Chemistry Development Kit
https://github.com/cea-metrocarac/images_alignment
Application to re-align images
https://github.com/centre-for-humanities-computing/graphematics
A collection of string processing and visualization scripts following the steps outlined in the "Handbuch zur graphematischen Rekonstruktion vormoderner Schreibsprachen".
https://github.com/ceresbarros/forestharvest-spadesmodule
A toy model of forest harvest by forest age and type
https://github.com/cfn-softbio/vision
Virtual Scientific Companion for Synchrotron Beamlines
https://github.com/cfosseprez/turning_points
Module to find and analyze turning points in trajectories
https://github.com/cgcl-codes/graphinstruct
The benchmark proposed in paper: GraphInstruct: Empowering Large Language Models with Graph Understanding and Reasoning Capability
https://github.com/cgre-aachen/gempy-gallery
Collection of gempy models built and shared by the community
https://github.com/chains-project/ddc4j
Diverse double compiling for Java. Bachelor thesis Elias and Eskil.
youthu
Tools for mapping a range of measures routinely collected in youth mental health services to AQoL 6D utility
objectdection-yolov5
Creating an object detection system for butterflies and flowers involves collecting annotated images, training a deep learning model (e.g., Faster R-CNN, YOLO), and validating for accuracy. Preprocessing ensures standardized features. Deployment with a user-friendly interface supports biodiversity monitoring, pest control, and habitat preservation.
2023-invasion_modules
Data and code for the study: Dijoux, S., Pichon, N. A., Sentis, A. and Boukal, D. S. (2024). Body size and trophic position determine the outcomes of species invasions along temperature and productivity gradients. Ecology Letters, 27, e14310.
2023-code-ifac-performance-analysis-for-time-varying-mas-with-packet-loss
Code for the paper "Robust Performance Analysis for Time-Varying Multi-Agent Systems with Stochastic Packet Loss" by C. Hespe and H. Werner
knowledge-collapse
replication code for "AI and the Problem of Knowledge Collapse"
gestationlength
Code and data for Feldblum, J. T., Boehm, E. E., Walker, K. K., & Pusey, A. E. (2022). Predictors and consequences of gestation length in wild chimpanzees. American Journal of Biological Anthropology, 179(3), 417-430.
qlcMatrix
Utility sparse matrix functions for Quantitative Language Comparison (QLC)
platalea
Library for training visually-grounded models of spoken language understanding.
midi2vec
MIDI2vec computes embeddings for representing MIDI data in vector space
movis
MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dominik Heider, and Georges Hattab
tdvp_and_qaoa
This is the repository associated to the bachelors thesis of Leonhard Richter.
gemelosdigitales-practica2-lotka-volterra-21212142_-banuelos-
Practica 2- Lotka-Volterra[21212142 Bañuelos]
emotionapp
Emotion app is a web application that can record learners’ emotions in real time and allow researchers to customize questionnaires.
cremma-medieval
Transcription corpora for training HTR models for medieval manuscripts from the 12th to the 15th century.
icon
Kinetic Monte-Carlo simulation of ionic conductivity in arbitrary crystalline structures
udmdet_tii
[TII 2024] An official implementation of ''A Novel Underwater Detection Method for Ambiguous Object Finding via Distraction Mining''
fuzzqrcodeunipd
QR Code Fuzzer Toolkit for Green Pass Checkers - Computer & Network Security Course @ UniPD
pyplatesolution
Python program to compute Green's functions of an infinite plate.
raintale
A Python utility for publishing a social media story built from archived web pages to multiple services.
top-countries-mentioned-by-donald-trump
🌎 A data visualization project showing the top countries and diplomatic relations mentioned by Donald Trump in his presidential term from 2017 to 2020.（展示唐纳德·特朗普在其2017年至2020年总统任期内提及的国家外交关系的数据可视化。）
rdm_constraints_renormalization
a demonstration of the constraints renormalization method described in https://arxiv.org/abs/2212.03014
droneobjectdetection
(Outdated) A UAV object detection system based on YOLOv3, providing an interactive interface and `VisDrone2018` training scheme.
synchronisation_scripts
This repository is a home for our work on synchronisation script. The scripts should synchronise git repositories upon double click.
fuzzyscript
Implementação do projeto de mestrado feito na universidade de campo limpo paulista.