GitHub
kerblam
A Rust CLI to manage your data analysis projects in a simple and streamlined way, getting reproducibility for free.
computational-algebra
General-Purpose Computer Algebra System as an EDSL in Haskell
marlware
Multi-Robot Warehouse (RWARE): A multi-agent reinforcement learning environment
gradio
Build and share delightful machine learning apps, all in Python. 🌟 Star to support our work!
treeple
Scikit-learn compatible decision trees beyond those offered in scikit-learn
technicalpaperexamplenotebooks
a collection of Jupyter notebooks used in the technical eWaterCycle paper
genmod
Annotate models of genetic inheritance patterns in variant files (vcf files)
verovio
🎵 Music notation engraving library for MEI with MusicXML and Humdrum support and various toolkits (JavaScript, Python)
pytesimal
Model the conductive cooling of small planetary bodies with temperature-dependent material properties
gpurecsplit
Parallel space-efficient minimal perfect hash function on SIMD and GPU
ezomero
A module with convenience functions for writing Python code that interacts with OMERO.
wtm
Use climate and topographic input data to compute depth to water table, and height of surface water as lakes.
netdiffuseR
netdiffuseR: Analysis of Diffusion and Contagion Processes on Networks
sliderule
Server and client framework for on-demand science data processing in the cloud
GeoStats.jl -- High-performance geostatistics in Julia
GeoStats.jl -- High-performance geostatistics in Julia - Published in JOSS (2018)
spezistorage
Spezi module to store information and credentials encrypted at rest
renal_segmentor
An application to segment kidneys from renal MRI data using a convolutional neural network.
spatial-frequency-preferences
An experiment to determine the relationship between spatial frequency and eccentricity in the human early visual cortex.
jwst-coronagraph-visibility
Visualize approximate pointing constraints for JWST coronagraphs.
mtg-jamendo-dataset
Metadata, scripts and baselines for the MTG-Jamendo dataset
kairos
Analysis of Chronological Patterns from Archaeological Count Data - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/kairos
pydesrap_mms
Reproducible analytical pipeline (RAP) for Python discrete-event simulation (DES) implementing an M/M/s queueing model.
compiler-gym
Reinforcement learning environments for compiler and program optimization tasks
alifedata-phyloinformatics-convert
alifedata-phyloinformatics-conversion helps apply traditional phyloinformatics software to alife standardized data
bentoml
The easiest way to serve AI apps and models - Build Model Inference APIs, Job queues, LLM apps, Multi-model pipelines, and more!
alectryon
A collection of tools for writing technical documents that mix Coq code and prose.
oemetadata
The OEMetadata is an energy metadata standard including a metadata schema, templates, and examples.
cobra
COBRApy is a package for constraint-based modeling of metabolic networks.
arkhe
Tools for cleaning rectangular data - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/arkhe
lextale
The LexTALE-package calculates the % correctAv score for the LexTALE-test, English, German and Dutch versions.
code-release
A repository analyzing the impact of open-source code in machine learning, robotics, and controls research
acces-coexsist
Learning simulation parameters from experimental data, from the micro to the macro, from laptops to clusters.
https://github.com/asdf-format/asdf-standard
Standards document describing ASDF, Advanced Scientific Data Format
clinicadl
Framework for the reproducible processing of neuroimaging data with deep learning methods
faninsar
A fancy InSAR time series library, in a Pythonic, fast, and flexible way.
vmas
VMAS is a vectorized differentiable simulator designed for efficient Multi-Agent Reinforcement Learning benchmarking. It is comprised of a vectorized 2D physics engine written in PyTorch and a set of challenging multi-robot scenarios. Additional scenarios can be implemented through a simple and modular interface.
eradiate
Eradiate: a next-generation radiative transfer model for Earth observation applications
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
cvmfs-venv
Example implementation of getting a Python virtual environment to work with CVMFS LCG views
scenedetect
:movie_camera: Python and OpenCV-based scene cut/transition detection program & library.
pyviko
A web interface & Python tool to design knockouts in viruses with overlapping genes.
publicationclassification
Java package for creating a multi-level classification of scientific publications based on citation links between publications.
pytorch-ignite
High-level library to help with training and evaluating neural networks in PyTorch flexibly and transparently.
@stdlib/random-base-mt19937
A 32-bit Mersenne Twister pseudorandom number generator.
glycowork
Package for processing and analyzing glycans and their role in biology.
aesara
Aesara is a Python library for defining, optimizing, and efficiently evaluating mathematical expressions involving multi-dimensional arrays.
atap_widgets
Python package containing interactive widgets for use in ATAP notebooks
folio
Datasets for Teaching Archaeology and Palaeontology - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/folio
hanpo-gem
Draft genome-scale model of Hansenula polymorpha (Ogataea polymorpha; Pichia angusta)
atmospheric-inverse-methods-for-flux-optimization
Functions for optimizing surface fluxes of some tracer to be consistent with atmospheric measurements of that tracer.
uform
Pocket-Sized Multimodal AI for content understanding and generation across multilingual texts, images, and 🔜 video, up to 5x faster than OpenAI CLIP and LLaVA 🖼️ & 🖋️
