GitHub
pyproj
Python interface to PROJ (cartographic projections and coordinate transformations library)
prob-epi
Course materials of "Bayesian Modelling and Probabilistic Programming with Numpyro, and Deep Generative Surrogates for Epidemiology"
CWatM
Community Water Model (CWatM) is a hydrological model simulating the water cycle daily at global and local levels, historically and into the future, maintained by IIASA’s Water Security group
annif
Annif is a multi-algorithm automated subject indexing tool for libraries, archives and museums.
warpv-configurator-chakra
WARP-V is an open-source RISC-V CPU core generator written in TL-Verilog.
torchdistill
A coding-free framework built on PyTorch for reproducible deep learning studies. PyTorch Ecosystem. 🏆26 knowledge distillation methods presented at CVPR, ICLR, ECCV, NeurIPS, ICCV, etc are implemented so far. 🎁 Trained models, training logs and configurations are available for ensuring the reproducibiliy and benchmark.
qslib
QSLib is a package for interacting with Applied Biosystems' QuantStudio qPCR machines, intended for non-qPCR uses, such as DNA computing and molecular programming systems.
galaxies-datasets
Galaxies Datasets is a collection of ready-to-use extragalactic astronomy datasets for use with TensorFlow and other Machine Learning frameworks.
archspec
A library for detecting, labeling, and reasoning about microarchitectures
https://github.com/alan-turing-institute/open-research-community-management
Establishing cross-community collaborations and promoting open research in data science
goneat
The GOLang implementation of NeuroEvolution of Augmented Topologies (NEAT) method to evolve and train Artificial Neural Networks without error back propagation
https://github.com/moj-analytical-services/splink
Fast, accurate and scalable probabilistic data linkage with support for multiple SQL backends
DiffEqBase
The lightweight Base library for shared types and functionality for defining differential equation and scientific machine learning (SciML) problems
mean-opinion-score
Python library for calculating the mean opinion score and 95% confidence interval of the standard deviation of text-to-speech ratings according to Ribeiro et al. (2011).
mani-skill
SAPIEN Manipulation Skill Framework, an open source GPU parallelized robotics simulator and benchmark, led by Hillbot, Inc.
depth-from-motion
[ECCV 2022 oral] Monocular 3D Object Detection with Depth from Motion
fcwt
The fast Continuous Wavelet Transform (fCWT) is a library for fast calculation of CWT.
resonances
A python package for identification of mean-motion resonances in the Solar system and other planetary systems.
pvanalytics
Quality control, filtering, feature labeling, and other tools for working with data from photovoltaic energy systems.
sdss-marvin
Data access and visualization for MaNGA. http://sdss-marvin.readthedocs.io/en/latest/
quit-store
🖧 Quads in Git - Distributed Version Control for RDF Knowledge Bases
swirl-code
The SWIRL code is a python implementation of the "Estimated Vortex Center" (EVC) method for an automated identification of vortices in two-dimensional velocity fields.
https://github.com/sciml/surrogates.jl
Surrogate modeling and optimization for scientific machine learning (SciML)
cellacdc
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
auction-gym
AuctionGym is a simulation environment that enables reproducible evaluation of bandit and reinforcement learning methods for online advertising auctions.
COINSTAC
COINSTAC: Collaborative Informatics and Neuroimaging Suite Toolkit for Anonymous Computation - Published in JOSS (2020)
simplemma
Simple multilingual lemmatizer for Python, especially useful for speed and efficiency
pyplif-hippos
HIPPOS Is PyPLIF On Steroids. A Molecular Interaction Fingerprinting Tool for Docking Results of Autodock Vina and PLANTS
scikit-hep
Metapackage of Scikit-HEP project data analysis packages for Particle Physics.
esmf
The Earth System Modeling Framework (ESMF) is a suite of software tools for developing high-performance, multi-component Earth science modeling applications.
CAST
Developer Version of the R package CAST: Caret Applications for Spatio-Temporal models
sars-cov-2-nowcasting_und_-r-schaetzung
Das Nowcasting erstellt eine Schätzung des Verlaufs der Anzahl von bereits erfolgten SARS-CoV-2-Erkrankungsfällen in Deutschland unter Berücksichtigung des Diagnose-, Melde- und Übermittlungsverzugs.
@digitallinguistics/dlx2html
A JavaScript library for converting linguistic data to HTML
https://github.com/cadam00/seagraphs
Sea Currents to Connectivity Transformation
cloupy
CLOUPY IS NO LONGER SUPPORTED. PLEASE, SEE README. cloupy is a Python library for climatological data downloading, processing and visualizing. The main goal of the library is to help its author in writing a BA thesis. The library is well adapted to academic work - used data sources are reliable and graphs are easy to modify.
gym-idsgame
An Abstract Cyber Security Simulation and Markov Game for OpenAI Gym
pyglotaran
A Python library for Global and Target Analysis of time-resolved spectroscopy data
pipelines-nextflow
A set of workflows written in Nextflow for Genome Annotation.
https://github.com/bioinfomachinelearning/dips-plus
The Enhanced Database of Interacting Protein Structures for Interface Prediction
era5cli
Command Line Interface to download ERA5 from Copernicus Climate Data Service
ahrc-linking-islands
A repository to hold the Jekyll site that will support the AHRC funded Linking Islands of Data project.
DecisionProgramming
DecisionProgramming.jl is a Julia package for solving multi-stage decision problems under uncertainty, modeled using influence diagrams. Internally, it relies on mathematical optimization. Decision models can be embedded within other optimization models.
lleaves
Compiler for LightGBM gradient-boosted trees, based on LLVM. Speeds up prediction by ≥10x.
rapidae
Explore, compare and develop autoencoder models with a back-end agnostic framework
citationchaser
Perform forward and backward citation chasing as part of an evidence synthesis project
leiden
Implementation of the Leiden algorithm called by reticulate in R. (CRAN)
mdanalysis
MDAnalysis is a Python library to analyze molecular dynamics simulations.
https://github.com/ami-iit/jaxsim
A differentiable physics engine and multibody dynamics library for control and robot learning.
https://github.com/alleninstitute/aics-segmentation
AICS Segmentation (One-Way) Mirror