GitHub

https://github.com

Updated 9 months ago

graph_distances • Science 67%

Codebase for computing distances between lineage trees

Updated 9 months ago

yolo_tracking • Science 67%

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cytosnake • Science 44%

Orchestrating high-dimensional cell morphology data processing pipelines

Updated 9 months ago

port-of-mars-analysis • Science 75%

R analysis pipeline for Port of Mars "Mars Madness" tournaments

Updated 9 months ago

heco • Science 67%

A julia package for linear Homogenization using FFT technique with CPU/GPU.

Updated 9 months ago

aisp-lab • Science 44%

Updated 9 months ago

stats-strided-dsemwd • Science 57%

Calculate the standard error of the mean for a double-precision floating-point strided array using Welford's algorithm.

Updated 9 months ago

srna-pipe • Science 44%

developpment of pipeline for small RNA

Updated 9 months ago

hsf-training-matplotlib • Science 44%

Create commonly used plots in HEP with matplotlib and mplhep

Updated 9 months ago

hsf-training-cicd-basics-webpage • Science 44%

An introduction to the basics of continuous integration (CI) and continuous deployment (CD).

Updated 9 months ago

model_spinorbitmerism • Science 44%

Codes used to generate the data and Figures of "Competition between Spinmerism and Spin-orbit for a d2 Metal Ion in An Open-Shell Ligand Field"

Updated 9 months ago

hsf-training-uproot-webpage • Science 44%

Learn to use uproot!

Updated 9 months ago

@stdlib/complex-float32-conj • Science 44%

Return the complex conjugate of a single-precision complex floating-point number.

Updated 9 months ago

autoates-v2.0 • Science 44%

A fully automated algorithm used to provide ATES mapping for large areas.

Updated 9 months ago

aiimg • Science 44%

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morrill-hall • Science 44%

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grchombokination • Science 49%

GRChombo modified to have a kination example

Updated 9 months ago

mosuite • Science 67%

Multi-OmicsSuite: R package for differential multi-omics analysis

Updated 9 months ago

specification • Science 44%

A specification that describes important properties of geometries

Updated 9 months ago

vcftomaf • Science 67%

Nextflow pipeline to convert VCF files into MAF files.

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astrodata • Science 62%

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stats-base-ndarray-sztest • Science 44%

Compute a one-sample Z-test for a one-dimensional single-precision floating-point ndarray.

Updated 9 months ago

graphfragments.jl • Science 57%

A Julia package for calculating graph fragmentation metrics, including parallelized implementations, to evaluate the impact of node removal on network connectivity.

Updated 9 months ago

spatialleiden • Science 57%

Implementation of multiplex Leiden for analysis of spatial omics data

Updated 9 months ago

qml-essentials • Science 54%

Python package with commonly used Ansaetze, tools and data-reuploading model in quantum machine learning.

Updated 9 months ago

activitywatch • Science 67%

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chmap • Science 67%

A python package focused on the detection, mapping, tracking, and general analysis of coronal holes in the solar corona.

Updated 9 months ago

controlsystemadapter-opc-ua-adapter • Science 57%

The OPC-UA implementation for the ControlSystemAdapter

Updated 9 months ago

hstrat-surface-concept • Science 67%

Algorithm development for lightweight fixed-length recency-proportional hereditary stratigraphy data structure

Updated 9 months ago

aimmd • Science 44%

aimmd (AI for Molecular Mechanism Discovery) autonomously steers (a large number of) molecular dynamics simulations to efficiently sample and understand rare transition events.

Updated 9 months ago

my-first-ph3-package • Science 44%

Python Boilerplate contains all the boilerplate you need to create a Python package.

Updated 9 months ago

sentimentdemo • Science 67%

AI BOM example. A simple sentiment analysis application, published solely as an artifact for the purpose of demonstrating a software bill of materials. Not recommended for any serious text classification task.

Scientific Software
Updated 9 months ago

sigmajs — Peer-reviewed • Science 93%

sigmajs: An R htmlwidget interface to the sigma.js visualization library - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Updated 9 months ago

segui • Science 44%

A GUI version of the SEGUL phylogenomic tool

Updated 9 months ago

historical-dates-ui • Science 54%

React UI component for annotating historical dates

Updated 9 months ago

nyplaybills • Science 44%

A collection of Broadway playbills from NYC

Updated 9 months ago

nf-rsvpipeline • Science 67%

Viral RSV analysis pipeline using Illumina or Oxford Nanopore Technologies amplicon-based sequencing data

Updated 9 months ago

bids-matlab • Science 67%

MATLAB / Octave tools for BIDS datasets

Updated 9 months ago

pediatric_cancer_atlas_profiling • Science 49%

Image analysis and image-based profiling of pediatic cancer cell lines to extract morphological profiles.

Updated 9 months ago

edrop-connector • Science 52%

eDROP Connector

Updated 9 months ago

crystal-ball-public • Science 44%

Code and data for Crystal Ball model.

Updated 9 months ago

versatile-xr-user-identification • Science 67%

Implementation of "Versatile User Identification in Extended Reality Using Pretrained Similarity-Learning". Deep metric learning approach for identifying VR users from their movements.

Updated 8 months ago

https://github.com/dmey/bitinformation.jl • Science 23%

Information between bits and bytes.

Updated 9 months ago

introduction-to-renv • Science 75%

Walkthrough tutorial on setting up and using renv

Scientific Software
Updated 9 months ago

Pyra — Peer-reviewed • Science 98%

Pyra: Automated EM27/SUN Greenhouse Gas Measurement Software - Published in JOSS (2023)

Updated 9 months ago

gym-pybullet-drone • Science 49%

This repo is the fork of GYM pybullet drone in which the drone can fly from reading the commands from txt file

Updated 9 months ago

master-thesis • Science 44%

Code for my master thiesis in Theoretical Quantum Optics from Niels Bohr Institute, University of Copenhagen with supervision by Professor Klaus Mølmer

Updated 9 months ago

acts • Science 67%

Experiment-independent toolkit for (charged) particle track reconstruction in (high energy) physics experiments implemented in modern C++

Updated 9 months ago

AlignedAllocs • Science 44%

lightweight cross-platform allocation of aligned memory for an n-Vector{T} where isbitstype(T)

Updated 9 months ago

6 • Science 49%

When is it favorable to do two-step or one-pot coupled enzyme reactions?

Updated 9 months ago

dockerunifieduimainterface • Science 67%

A UIMA-based tool for the scaled, uniform, distributed, platform-independent and easily reusable use of Natural Language Processing (NLP) methods using Docker.

Updated 9 months ago

datetime-repeat • Science 44%

A library to create and iterate through complex sequences of repeating dates and times in Python.

Updated 9 months ago

module-open-science-dm-practices • Science 44%

Open Science module for Data Management course (carpentries style)

Updated 9 months ago

ExponentialFamily • Science 67%

ExponentialFamily.jl is a Julia package that extends the functionality of Distributions.jl by providing a collection of exponential family distributions and customized implementations.

Updated 9 months ago

htm-scheme • Science 57%

Hierarchical Temporal Memory in Scheme: some algorithms and experiments from numenta/htmresearch translated to Scheme

Updated 9 months ago

@stdlib/blas-base-scasum • Science 44%

Compute the sum of the absolute values of the real and imaginary components of a single-precision complex floating-point vector.

Updated 9 months ago

boeken_tau_simpull • Science 67%

This repository contains the code and data for the Tau SiMPull methods paper, led by Dorothea Böken

Updated 9 months ago

kettle-soup-cover • Science 44%

A Covered Kettle of SOUP, A Code Coverage Meta Gem

Updated 8 months ago

https://github.com/dmey/ecrad • Science 13%

ECMWF atmospheric radiation scheme

Updated 9 months ago

lcwgsus • Science 44%

processing low-coverage vcf files

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communibus • Science 44%

Updated 9 months ago

hagis • Science 59%

Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity

Updated 9 months ago

cybersecurity • Science 44%

Sixth semester CP

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alex-test • Science 44%

Updated 9 months ago

catacycle_web • Science 44%

A web-based interface to generate visualizations of the rates of various steps in a catalytic cycle, which can be customized by the user. Population of a web form using known data will generate a graphic for annotation by the user to represent their chemistry.

Updated 9 months ago

fx_restrictions • Science 44%

Dataset with an indicator of capital controls and exchange rate market restrictions by country

Updated 9 months ago

mh2dgrav • Science 57%

:earth_asia: MH2DGRAV is continuous two-dimension inversion of Gravity data based on Talwani formulation using very fast simulated annealing (VFSA) in MATLAB.

Updated 9 months ago

csed-help-seeking • Science 44%

Website

Updated 9 months ago

mh1ddc • Science 67%

:earth_asia: MH1DDC is inversion software using Levenberg-Marquardt (LM) and Singular Value Decomposition (SVD) of one-dimension DC resistivity in MATLAB.

Updated 9 months ago

undate-notebook-usrse25 • Science 54%

Notebook submission on Undate python library for US-RSE'25

Updated 9 months ago

oakville-land-use-classification • Science 44%

Optimizing Deep Learning Models for Classifying Urban Land Cover.

Updated 8 months ago

https://github.com/dmey/elefridge.jl • Science 13%

Compressing atmospheric data into its real information

Updated 9 months ago

vhsjuliakurspackage.jl • Science 44%

Übungspaket für Julia-Kurs

Updated 9 months ago

irb-kit • Science 44%

Extends IRB by providing additional productivity enhancements.

Updated 9 months ago

mcpmod • Science 44%

MCP-Mod for small samples with binary endpoint.

Updated 9 months ago

ndnd • Science 44%

Golang implementation of the Named Data Networking protocol stack

Updated 9 months ago

openfuelcell2 • Science 44%

openFuelCell2 is a computational fluid dynamics (CFD) toolbox for simulating electrochemical devices such as fuel cells and electrolysis. The solver is based on the open-source library, OpenFOAM®.