GitHub
gsea_refiner
A python tool for interpreting pathway enrichment results using NLP techniques.
https://github.com/evamart/trimal-meta
Trimal metadata for development of Software Management Wizard importer.
crocodeel
CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data
stats-array-mskmin
Calculate the minimum value of an array according to a mask.
ke-rcnn
KE-RCNN: unifying knowledge based reasoning into part-level attribute parsing (TCYB 2022)
automataci
[MIRROR] An open-source, redistributable, template-guided, and semi-autonomous CI infrastructure readily available your next project.
pyrocko
An official read-only mirror of https://git.pyrocko.org/pyrocko/pyrocko. A seismology toolkit for Python.
@stdlib/math-base-special-asecdf
Compute the arcsecant (in degrees) of a single-precision floating-point number.
df-compress
A python package to compress pandas dataframes akin to Stata's `compress` command.
bwa_align_stats
short nextflow pipeline to align against a reference genome and produce pile up documents
tread
tread is an R package to extract data from Excel files generated by Tecan Infinite 200 Pro plate readers
clean
A nextflow pipeline for decontamination of short reads, long reads and contigs
paper-self-gravitating-gas-dynamics
A purely hyperbolic discontinuous Galerkin approach for self-gravitating gas dynamics
balrog-mon
A Nextflow pipeline for Antimicrobial Resistatnce exploration in metagenomic samples
stats-strided-dmeanpw
Calculate the arithmetic mean of a double-precision floating-point strided array using pairwise summation.
lang-nds
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Low German language
lang-krl
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Karelian language
stats-strided-dsempn
Calculate the standard error of the mean for a double-precision floating-point strided array using a two-pass algorithm.
lang-tgl
Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Tagalog language
number-float64-base-assert-is-almost-equal
Test if two double-precision floating-point numbers are approximately equal within a specified number of ULPs (units in the last place).
kernscr
Kernel Machine Score Test for Pathway Analysis in the Presence of Semi-Competing Risks
ipd
R package to perform statistically valid and efficient inference with predicted data (IPD) using state-of-the-art methods.
exostriker
Transit and Radial velocity Interactive Fitting tool for Orbital analysis and N-body simulations: The Exo-Striker
@stdlib/random-strided-tools-ternary-factory
Create a factory function for filling strided arrays with pseudorandom values drawn from a ternary PRNG.
fernandezalonsoetal_jpinealres_2025
Repository for the article "Standardized and calibrated light stimuli via head-mounted displays for investigating the non-visual effects of light" by Fernandez-Alonso & Spitschan (2025)
prepost
R package for analyzing interactions in survey experiments with priming or post-treatment bias
stats-strided-sminsorted
Calculate the minimum value of a sorted single-precision floating-point strided array.
rbahadur
Efficient simulation of genotype / phenotype data under assortative mating using the Bahadur order-2 multivariate Bernoulli distribution
blas-ext-base-wasm-dnanasumors
Calculate the sum of absolute values (L1 norm) of double-precision floating-point strided array elements, ignoring NaN values and using ordinary recursive summation.
spatpomp
R package for statistical inference of spatiotemporal partially observed Markov processes
3d_harmonic_loss_for_object_detection
3D Harmonic Loss: Towards Task-consistent and Time-friendly 3D Object Detection on Edge for V2X Orchestration
1
When determining equilibrium constants of multi-substrate / multi-product reactions, their ratios affect the uncertainty of the result.
access-om2
Deprecated ACCESS-OM2 global ocean - sea ice coupled model code and configurations.
redundans
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
arch2022_nln_re
Repeatability evaluation package for the ARCH2022 NLN competition
J-UBIK: The JAX-accelerated Universal Bayesian Imaging Kit
J-UBIK: The JAX-accelerated Universal Bayesian Imaging Kit - Published in JOSS (2026)
tcrm
A statistical-parametric model for assessing wind hazard from tropical cyclones
firedpy
A Python Command Line Interface for classifying fire events from the Collection 6 MODIS Burned Area Product.
