GitHub
legend-pygeom-hpges
Germanium detector geometries for radiation transport simulations
biomass_yieldtables
Generate yield tables generated by the Biomass_core module
smith-embedding
Mathematica code to generate the Smith embedding (a.k.a. rectangle packing) of a planar map.
magic_performances_2015_data_tables
An extraction of data tables from the MAGIC performance paper of 2015
roship_io
A collection of ROS2 Nodes and a library for comminicating with external devices over UDP, TCP, and serial.
math-base-special-roundf
Round a single-precision floating-point number to the nearest integer.
math-base-special-xlogyf
Compute `x * ln(y)` so that the result is `0` if `x = 0` for single-precision floating-point numbers `x` and `y`.
crypticphenotypeanalysisscripts
A collection scripts used in the cryptic phenotype analysis manuscript.
fstmorph
A set of scripts for generating an FST and associated yaml tests from spreadsheets.
redcap_javascript_injector
A REDCap External Module that allows injection of JavaScript on pages.
gdt
GDT is a tool for gene dictionary management, works with annotated genomes, handles .gdict and GFF3 files, and provides both programmatic and interactive interface.
amino
Aggregate data and R scripts used to interpret and plot HPLC and Raman spectroscopy data related to amino acid preservation within Martian regolith simulants
hort-lidar-processing
This repository contains the code and spreadsheet data for all lidar processing operations. Point clouds are stored separately in Purdue Box.
context-engineering
"Context engineering is the delicate art and science of filling the context window with just the right information for the next step." — Andrej Karpathy. A frontier, first-principles handbook inspired by Karpathy and 3Blue1Brown for moving beyond prompt engineering to the wider discipline of context design, orchestration, and optimization.
phylotrack-algorithm-analysis
Manuscript, split from hstrat-algorithm-analysis
life-hunting
Full code used to produce my MRes project results on "Quantifying Species-Specific Responses to Hunting Pressure."
about
Documentation, guides, templates, and how to's for scientists and data managers working on the International Year of the Salmon 2022 Expedition
https://github.com/dcan-labs/daic2hcp
tool for projecting preprocessed volumetric MR data from the DAIC onto HCP grayordinates
mt-smac
A novel approach designed for optimizing highly parametrized algorithms.
livestocksim
Provides a series of functions to process walk-over weight data and simulate daily weights of cattle.
za-isizulu-siswati-news-2022
IsiZulu News (articles and headlines) and Siswati News (headlines) Corpora - za-isizulu-siswati-news-2022
redcap_nedcaptcha
A REDCap External Module that provides CAPTCHAs without any external service dependencies.
fanuc
Code & data for “Fatigue-Aware Sub-Second Combinatorial Auctions for Dynamic Cycle Allocation in Human–Robot Collaborative Assembly”.
betadescribe-code
Protein2Text: Providing Rich Descriptions from Protein Sequences
darts-nextgen
Panarctic Database of Active Layer Detachment Slides and Retrogressive Thaw Slumps from Deep Learning on High Resolution Satellite Imagery.
2025-05-20-utk-online
DC workshop website organized by University of Tennessee Knoxville on May 20 - 21, 2025
go-n3rdet
[CVPR 2025] GO-N3RDet: Geometry Optimized NeRF-enhanced 3D Object Detector
pypomp
Inference and modeling for partially observed Markov process (POMP) models
trustpy-tools
TrustPy is a production-ready Python package purpose-built for MLOps pipelines—enabling automated, interpretable analysis of model trustworthiness and predictive reliability before deployment. Available via Conda-Forge and PyPI, with full CI/CD integration and seamless compatibility across modern ML stacks.
libcirkit
a python framework to build, learn and reason about probabilistic circuits and tensor networks
robotiq_hande_description
Contains meshes and URDF description of the Robotiq Hand-E gripper.
bam-to-fastq-qc
Conversion of files from BAM to FASTQ, including FASTQC & CCS.BAM file quality control (QC) steps.
augmentations-for-the-unknown
This repository contains the official implementation of "Data-Agnostic Augmentations for Unknown Variations - Out-of-Distribution Generalisation in MRI Segmentation", under review at MIDL 2025.