QUPS — Peer-reviewed • Science 100%

QUPS: A MATLAB Toolbox for Rapid Prototyping of Ultrasound Beamforming and Imaging Techniques - Published in JOSS (2024)

dsmmR — Peer-reviewed • Science 93%

dsmmR: Estimation and Simulation of Drifting Semi-Markov Models - Published in JOSS (2024)

Fortuna.jl — Peer-reviewed • Science 100%

Fortuna.jl: Structural and System Reliability Analysis in Julia - Published in JOSS (2024)

mathlib — Peer-reviewed • Science 93%

mathlib: A Scala package for readable, verifiable and sustainable simulations of formal theory - Published in JOSS (2024)

Reggae — Peer-reviewed • Science 49%

Reggae: A Parametric Tuner for PBJam, and a Visualization Tool for Red Giant Oscillation Spectra - Published in JOSS (2024)

BiGGer — Peer-reviewed • Science 100%

BiGGer: A Model Transformation Tool written in Java for Bigraph Rewriting in GrGen.NET - Published in JOSS (2024)

MousebreedeR — Peer-reviewed • Science 93%

MousebreedeR: A novel software to assist in the design of breeding schema for complex genotypes of experimental organisms - Published in JOSS (2024)

SpiDy.jl — Peer-reviewed • Science 93%

SpiDy.jl: open-source Julia package for the study of non-Markovian stochastic dynamics - Published in JOSS (2024)

Anime — Peer-reviewed • Science 93%

Anime: Atmospheric and Instrument Models in the Measurement Equation - Published in JOSS (2024)

agweather-qaqc — Peer-reviewed • Science 100%

agweather-qaqc: An Interactive Python Package for Quality Assurance and Quality Control of Daily Agricultural Weather Data and Calculation of Reference Evapotranspiration - Published in JOSS (2024)

GIRFReco.jl — Peer-reviewed • Science 100%

GIRFReco.jl: An Open-Source Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia - Published in JOSS (2024)

https://github.com/jbrea/tabularreinforcementlearning.jl • Science 13%

goFlux — Peer-reviewed • Science 95%

goFlux: A user-friendly way to calculate GHG fluxes yourself, regardless of user experience - Published in JOSS (2024)

https://github.com/lynn-miller/lfmc_from_modis • Science 13%

Live fuel moisture content estimation from MODIS: a deep learning approach

https://github.com/jbrea/rememberingthewhen.jl • Science 26%

MicroTracker.jl — Peer-reviewed • Science 98%

MicroTracker.jl: A Julia package for microbot research - Published in JOSS (2024)

https://github.com/jbrea/jbrea.github.io • Science 13%

NOMAD — Peer-reviewed • Science 49%

NOMAD: A distributed web-based platform for managing materials science research data - Published in JOSS (2023)

RelativisticDynamics.jl — Peer-reviewed • Science 93%

RelativisticDynamics.jl: Relativistic Spin-Orbital Dynamics in Julia - Published in JOSS (2023)

brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning — Peer-reviewed • Science 93%

brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning - Published in JOSS (2023)

guitools • Science 44%

Generates taxonomic abundance from bracken report file

https://github.com/jbrea/spikingequilibriumprop • Science 13%

PyBullet Industrial — Peer-reviewed • Science 100%

PyBullet Industrial: A process-aware robot simulation - Published in JOSS (2023)

https://github.com/jbrea/bayesoptbuilder.jl • Science 13%

https://github.com/jbrea/planningvscompensatorycaching.jl • Science 23%

MultilayerGraphs.jl — Peer-reviewed • Science 98%

MultilayerGraphs.jl: Multilayer Network Science in Julia - Published in JOSS (2023)

https://github.com/jbrea/symmetrysaddles.jl • Science 23%

histoc — Peer-reviewed • Science 93%

histoc: Histocompatibility analysis performed by kidney allocation systems - Published in JOSS (2022)

btllib — Peer-reviewed • Science 98%

btllib: A C++ library with Python interface for efficient genomic sequence processing - Published in JOSS (2022)

GHEtool — Peer-reviewed • Science 98%

GHEtool: An open-source tool for borefield sizing in Python - Published in JOSS (2022)

Accelerating Parallel Operation for Compacting Selected Elements on GPUs — Peer-reviewed • Science 95%

Accelerating Parallel Operation for Compacting Selected Elements on GPUs - Published in JOSS (2022)

NeuralFieldEq.jl — Peer-reviewed • Science 93%

NeuralFieldEq.jl: A flexible solver to compute Neural Field Equations in several scenarios - Published in JOSS (2022)

https://github.com/erictleung/poofsi • Science 23%

:zap: Learn concepts from Nature Methods' series "Points of Significance"

rabpro — Peer-reviewed • Science 100%

rabpro: global watershed boundaries, river elevation profiles, and catchment statistics - Published in JOSS (2022)

https://github.com/assert-kth/mokav • Science 49%

Generating difference exposing tests in Python http://arxiv.org/pdf/2406.10375

https://github.com/erictleung/erictleung.github.io • Science 13%

:memo: Source code for my website, portfolio of projects, and more

LoadProfileGenerator — Peer-reviewed • Science 98%

LoadProfileGenerator: An Agent-Based Behavior Simulation for Generating Residential Load Profiles - Published in JOSS (2022)

https://github.com/erictleung/dada2hpcpipe • Science 13%

:ocean: 16S rRNA microbiome data analysis workflow using DADA2 and R on a high performance cluster using SLURM

Bam-readcount - rapid generation of basepair-resolution sequence metrics — Peer-reviewed • Science 98%

Bam-readcount - rapid generation of basepair-resolution sequence metrics - Published in JOSS (2022)

JASP for Audit — Peer-reviewed • Science 95%

JASP for Audit: Bayesian Tools for the Auditing Practice - Published in JOSS (2021)

gemelos-digitales-leyes-de-crecimiento-exponencial-21212142_-banuelos- • Science 57%

Practica 1- Leyes de crecimiento exponencial[21212142 Bañuelos]

gamut — Peer-reviewed • Science 98%

gamut: A Geospatial R Package to Analyze Multisectoral Urban Teleconnections - Published in JOSS (2021)

https://github.com/erictleung/jamia-markdown-template • Science 13%

:closed_book: Unofficial Journal of American Medical Informatics Association (JAMIA) Markdown Journal Article Template

netpd-lab-site • Science 44%

isi_wiretap_channels.constrained_secrecy_capacity • Science 54%

reasoning_multimodal_llms • Science 44%

cumulative-effect-of-orbital-resonances-in-emris • Science 57%

Mathematica scripts used to produce the results presented in 2502.20457.

gimic • Science 67%

Gauge-including magnetically induced currents.

my_distiller • Science 44%

my distillation runner based on mmcls

mzkit • Science 49%

Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.

nileis_de • Science 44%

nonspectral-hummingbird-vision • Science 44%

Code and data for "Wild hummingbirds discriminate nonspectral colors"

chinese-text-error-correction • Science 44%

occupations-qualtrics • Science 44%

An implementation of select2 to capture occupations using Canadian NOC codes in Qualtrics

cosma • Science 67%

Cosma is a document graph visualization tool. It modelizes interlinked Markdown files and renders them as an interactive network in a web interface.

ultralytics • Science 54%

Ultralytics YOLO11

environment-geodatabase • Science 67%

Repository to automate the building and sharing of GIS data using Docker, OGC standards and PostGIS tools.

autogpt • Science 44%

AutoGPT-autogpt-platform-beta-v0.6.8

autohist.jl • Science 98%

Fast and automatic histogram construction in Julia

latex-proj-skel • Science 44%

doi-regex • Science 67%

Regular expression for matching DOIs

gnom • Science 67%

GNOM v2: An optimized steady-state model of the modern global marine neodymium cycle

sakaiza-website • Science 44%

Source code for Sakaiza's website

ear • Science 75%

ERGA Assembly Report pipeline

goldspace • Science 44%

hj_transformers_demo • Science 49%

2025-06-25-ncl • Science 44%

Programming with Python

making-good-prs • Science 44%

stable-diffusion-web-ui-custom • Science 54%

shadow_dom • Science 44%

Local mirror of the Archive of Formal Proof (AFP) entry "Shadow_DOM".

build123d • Science 67%

A python CAD programming library

lc-python-apis • Science 44%

Draft of a new Python lesson for Library Carpentry using OpenAlex API

typst-template-report-pcr • Science 44%

Unofficial Typst template to write report in Politeknik Caltex Riau

stats-strided-nanvariancech • Science 57%

Calculate the variance of a strided array ignoring NaN values and using a one-pass trial mean algorithm.

stats-array-nanstdevtk • Science 44%

Calculate the standard deviation of an array ignoring `NaN` values and using a one-pass textbook algorithm.

stats-array-nanstdevyc • Science 44%

Calculate the standard deviation of an array ignoring `NaN` values and using a one-pass algorithm proposed by Youngs and Cramer.

stats-strided-sztest2 • Science 44%

Compute a two-sample Z-test for two single-precision floating-point strided arrays.

math-base-special-cpolarf • Science 44%

Compute the absolute value and the phase of a single-precision complex floating-point number.

shared-genetics-of-lung-gut-axis • Science 44%

A genome-wide cross-trait analysis characterizes the shared genetic architecture between lung and gastrointestinal diseases.

wpilib-copilot • Science 44%

Your WPILib Pair Programmer

eigenfactor_analysis • Science 44%

maia-sandbox2 • Science 44%

viewer • Science 44%

デジタルアーカイブ関連ツール

mother-db-annotation-tools • Science 44%

This repository contains code for the MOTHER-DB.org specifically related to image segmentation and annotation work flows. MOTHER-DB is a database, meta-data archive and set of programs for annotating and storing ovary histology images from a wide range of species.

reproducibility-confidential • Science 52%

Reproducibility when data are confidential

gnark • Science 54%

market-state-cross-sectional-momentum • Science 44%

insect-detect • Science 67%

Detection models and Python scripts for automated insect monitoring with the Insect Detect DIY camera trap.

array-struct-factory • Science 44%

Return a constructor for creating arrays having a fixed-width composite data type.

stats-base-ndarray-cumax • Science 44%

Compute the cumulative maximum value of a one-dimensional ndarray.

stats-base-ndarray-dcumax • Science 44%

Compute the cumulative maximum value of a one-dimensional double-precision floating-point ndarray.

glass • Science 54%

Qompass AI Glass: Your secure remote portal

beacon • Science 54%

Beacon: Quality e-mail solution

shell • Science 54%

Educational Content on all things Shell

git • Science 54%

Equator Git: Educational Content on Git

threejs • Science 67%

Qompass AI on the three.js framework

opensuse • Science 54%

Qompass AI on OpenSUSE

qssl • Science 54%

Qompass AI SSL Solution

nginx • Science 54%

Qompass AI on NGINX

list • Science 44%