GitHub
py-torchtext
Models, data loaders and abstractions for language processing, powered by PyTorch
mapie
A scikit-learn-compatible library for estimating prediction intervals and controlling risks, based on conformal predictions.
chameleon
Repository for Meta Chameleon, a mixed-modal early-fusion foundation model from FAIR.
SBMLToolkit
SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit
fr.inria.gforge.spoon:spoon-core
Spoon is a metaprogramming library to analyze and transform Java source code. :spoon: is made with :heart:, :beers: and :sparkles:. It parses source files to build a well-designed AST with powerful analysis and transformation API.
semmcci
semmcci: Monte Carlo Confidence Intervals in Structural Equation Modeling
tidyLPA
tidyLPA: An R Package to Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial Software - Published in JOSS (2018)
aac-metrics
Metrics for evaluating Automated Audio Captioning systems, designed for PyTorch.
opendp
The core library of differential privacy algorithms powering the OpenDP Project.
BASiCS
BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/packages/BASiCS/ for the official release version
aspecd
Python framework for handling spectroscopic data focussing on reproducibility
JumpProcesses
Build and simulate jump equations like Gillespie simulations and jump diffusions with constant and state-dependent rates and mix with differential equations and scientific machine learning (SciML)
pyrfu
Python routines to work with space data, particularly with MMS data. Also some general plasma routines.
llmcompressor
Transformers-compatible library for applying various compression algorithms to LLMs for optimized deployment with vLLM
infomeasure
Python package for calculating various information measures, including entropy, mutual information, transfer entropy, and more, with support for both discrete and continuous variables.
MIToS
A Julia package to analyze protein sequences, structures, and evolutionary information
VAPOR
VAPOR is the Visualization and Analysis Platform for Ocean, Atmosphere, and Solar Researchers
pomp
R package for statistical inference using partially observed Markov processes
swarms
The Enterprise-Grade Production-Ready Multi-Agent Orchestration Framework. Website: https://swarms.ai
prince
:crown: Multivariate exploratory data analysis in Python — PCA, CA, MCA, MFA, FAMD, GPA
xcsf
XCSF learning classifier system: rule-based online evolutionary machine learning
@fang-bing-jiang/cornerstone-core
[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/
scikit-surgerybard
BARD: The Basic Augmented Reality Demo, used at MedICSS summer school.
evfuncs
Functions for working with files created by the EvTAF program and the evsonganaly GUI
flare-capa
The FLARE team's open-source tool to identify capabilities in executable files.
numbat
A statically typed programming language for scientific computations with first class support for physical dimensions and units
@haniffalab/cherita-react
A React component library designed for data visualisation and analysis of single-cell and spatial multi-omics data
matpower
MATPOWER – steady state power flow simulation and optimization for MATLAB and Octave
open-sustainable-technology
A directory and analysis of the open source ecosystem in the areas of climate change, sustainable energy, biodiversity and natural resources. https://docs.getgrist.com/gSscJkc5Rb1R/OpenSustaintech
pyhexwatershed
The Python interface to HexWatershed a mesh independent flow direction model for hydrologic models
https://github.com/broadinstitute/bmxp
The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics Platform.
outset
add zoom indicators, insets, and magnified panels to matplotlib/seaborn visualizations with ease!
unitvelo
UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference
fitz-collection-online
A repository to hold the code for the front end/API of the Fitzwilliam Museum's Collections Explorer
geometricus
A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
loghub
A large collection of system log datasets for AI-driven log analytics [ISSRE'23]
academic-tracker
Academic Tracker is a package that can search PubMed, Crossref, ORCID, and Google Scholar for publications given a list of authors or publication citations.
ordinalsimr
R package and Shiny app for simulating ordinal endpoint results. Try it here: https://6fcd1k-pat.shinyapps.io/ordinalsimr/
gfw-api-python-client
Python package for accessing data from Global Fishing Watch APIs
https://github.com/astropy/pytest-astropy-header
pytest plugin to add diagnostic information to the header of the test output
