TAXPASTA
TAXPASTA: TAXonomic Profile Aggregation and STAndardisation - Published in JOSS (2023)
scalene
Scalene: a high-performance, high-precision CPU, GPU, and memory profiler for Python with AI-powered optimization proposals
viztracer
A debugging and profiling tool that can trace and visualize python code execution
taxprofiler
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
lo2s
Linux OTF2 Sampling - A Lightweight Node-Level Performance Monitoring Tool
zns-tools
A set of tools for understanding F2FS usage of ZNS devices, which allow for identifying the on-device locations of files and inodes, mapping the data layout of F2FS files to ZNS zones, and a tracing framework that records I/O activity for ZNS devices and generates visuals of various operational aspects.
createtaxdb
Parallelised and automated construction of metagenomic classifier databases of different tools