The drake R package
The drake R package: a pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2018)
The targets R package
The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2021)
Using the tidyverse with terra objects
Using the tidyverse with terra objects: the tidyterra package - Published in JOSS (2023)
Managing Larger Data on a GitHub Repository
Managing Larger Data on a GitHub Repository - Published in JOSS (2018)
Generating CodeMeta Metadata for R Packages
Generating CodeMeta Metadata for R Packages - Published in JOSS (2017)
osmdata
osmdata - Published in JOSS (2017)
cffr
cffr: Generate Citation File Format Metadata for R Packages - Published in JOSS (2021)
GSODR
GSODR: Global Summary Daily Weather Data in R - Published in JOSS (2017)
terrainr
terrainr: An R package for creating immersive virtual environments - Published in JOSS (2022)
Zoomerjoin
Zoomerjoin: Superlatively-Fast Fuzzy Joins - Published in JOSS (2023)
quadkeyr
quadkeyr: Tools for converting QuadKey-identified datasets (Microsoft's Bing Maps Tile System) into raster images and analyzing Meta (Facebook) Mobility Data - Published in JOSS (2024)
ijtiff
ijtiff: An R package providing TIFF I/O for ImageJ users - Published in JOSS (2018)
hydroscoper
hydroscoper: R interface to the Greek National Data Bank for Hydrological and Meteorological Information - Published in JOSS (2018)
getCRUCLdata
getCRUCLdata: Use and Explore CRU CL v. 2.0 Climatology Elements in R - Published in JOSS (2017)
gaussplotR
gaussplotR: Fit, Predict and Plot 2D-Gaussians in R - Published in JOSS (2021)
dwctaxon, an R package for editing and validating taxonomic data in Darwin Core format
dwctaxon, an R package for editing and validating taxonomic data in Darwin Core format - Published in JOSS (2024)
experDesign
experDesign: stratifying samples into batches with minimal bias - Published in JOSS (2021)
daiquiri
daiquiri: Data Quality Reporting for Temporal Datasets - Published in JOSS (2022)
phylogram
phylogram: an R package for phylogenetic analysis with nested lists - Published in JOSS (2018)
rcites
rcites: An R package to access the CITES Speciesplus database - Published in JOSS (2018)
workloopR
workloopR: Analysis of work loops and other data from muscle physiology experiments in R - Published in JOSS (2019)
weatherOz
weatherOz: An API Client for Australian Weather and Climate Data Resources in R - Published in JOSS (2024)
The jagstargets R package
The jagstargets R package: a reproducible workflow framework for Bayesian data analysis with JAGS - Published in JOSS (2021)
medrxivr
medrxivr: Accessing and searching medRxiv and bioRxiv preprint data in R - Published in JOSS (2020)
bikedata
bikedata - Published in JOSS (2017)
The stantargets R package
The stantargets R package: a workflow framework for efficient reproducible Stan-powered Bayesian data analysis pipelines - Published in JOSS (2021)
fellingdater
fellingdater: a toolkit to estimate, report and combine felling dates derived from historical tree-ring series - Published in JOSS (2024)
spanishoddata
Access national high-quality and open-access datasets on movement patterns derived from mobile telephone datasets / Accede y usa datos nacionales abiertos sobre movimientos basados en teléfonos móviles.
gigs
gigs: A package for standardising fetal, neonatal, and child growth assessment - Published in JOSS (2025)
RefManageR
RefManageR: Import and Manage BibTeX and BibLaTeX References in R - Published in JOSS (2017)
FedData
Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
datapackager
An R package to enable reproducible data processing, packaging and sharing.
mapSpain
R package with the administrative boundaries of Spain, including CCAA, provinces and municipalities
finbif
R interface for the Finnish Biodiversity Information Facility (FinBIF) API
igor
R package to extract information from the Intergovernmental Organizations ('IGO') Database , version 3, provided by the Correlates of War Project https://correlatesofwar.org/
CoordinateCleaner
Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.
beautier
R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
reproducibility_in_plant_pathology
A systematic/quantitative review of articles, which provides a basis for identifying what has been done so far in the field of plant pathology research reproducibility and suggestions for ways to improving it.
aorsf
aorsf: An R package for supervised learning using the oblique random survival forest - Published in JOSS (2022)
isogeochem
isogeochem makes working with carbonate oxygen, carbon, and clumped isotope data reproducible and straightforward. Use it to quickly calculate isotope fractionation factors, and apply paleothermometry equations.
git2rdata
An R package for storing and retrieving data.frames in git repositories.
poems
Pattern-oriented ensemble modelling and simulation (with spatially explicit populations)
rdflib
:package: High level wrapper around the redland package for common rdf applications
outsider
outsider: Install and run programs, outside of R, inside of R - Published in JOSS (2020)
riem
:airplane: :sunny: R package for accessing ASOS data via the Iowa Environment Mesonet :cloud: :airplane:
