Scientific Software
Updated 11 months ago

The drake R package — Peer-reviewed • Rank 22.7 • Science 95%

The drake R package: a pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2018)

Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

The targets R package — Peer-reviewed • Rank 22.4 • Science 95%

The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2021)

Engineering Sociology Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Using the tidyverse with terra objects — Peer-reviewed • Rank 16.5 • Science 100%

Using the tidyverse with terra objects: the tidyterra package - Published in JOSS (2023)

Scientific Software
Updated 11 months ago

osrm — Peer-reviewed • Rank 15.9 • Science 100%

osrm: Interface Between R and the OpenStreetMap-Based Routing Service OSRM - Published in JOSS (2022)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Managing Larger Data on a GitHub Repository — Peer-reviewed • Rank 20.0 • Science 95%

Managing Larger Data on a GitHub Repository - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Generating CodeMeta Metadata for R Packages — Peer-reviewed • Rank 19.6 • Science 95%

Generating CodeMeta Metadata for R Packages - Published in JOSS (2017)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

simstudy — Peer-reviewed • Rank 14.2 • Science 100%

simstudy: Illuminating research methods through data generation - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Visualizations with statistical details — Peer-reviewed • Rank 19.1 • Science 95%

Visualizations with statistical details: The 'ggstatsplot' approach - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

osmdata — Peer-reviewed • Rank 20.9 • Science 93%

osmdata - Published in JOSS (2017)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

oce — Peer-reviewed • Rank 16.4 • Science 95%

oce: an R package for Oceanographic Analysis - Published in JOSS (2022)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

cffr — Peer-reviewed • Rank 13.3 • Science 98%

cffr: Generate Citation File Format Metadata for R Packages - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

GSODR — Peer-reviewed • Rank 18.3 • Science 93%

GSODR: Global Summary Daily Weather Data in R - Published in JOSS (2017)

Scientific Software
Updated 11 months ago

neotoma2 — Peer-reviewed • Rank 10.8 • Science 100%

neotoma2: An R package to access data from the Neotoma Paleoecology Database - Published in JOSS (2023)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

terrainr — Peer-reviewed • Rank 11.9 • Science 98%

terrainr: An R package for creating immersive virtual environments - Published in JOSS (2022)

Scientific Software
Updated 11 months ago

Zoomerjoin — Peer-reviewed • Rank 11.5 • Science 98%

Zoomerjoin: Superlatively-Fast Fuzzy Joins - Published in JOSS (2023)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

set6 — Peer-reviewed • Rank 14.4 • Science 95%

set6: R6 Mathematical Sets Interface - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

osmapiR — Peer-reviewed • Rank 11.0 • Science 98%

osmapiR: An 'OpenStreetMap API' implementation for R - Published in JOSS (2024)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ijtiff — Peer-reviewed • Rank 15.9 • Science 93%

ijtiff: An R package providing TIFF I/O for ImageJ users - Published in JOSS (2018)

Scientific Software
Updated 11 months ago

hydroscoper — Peer-reviewed • Rank 15.8 • Science 93%

hydroscoper: R interface to the Greek National Data Bank for Hydrological and Meteorological Information - Published in JOSS (2018)

Scientific Software
Updated 11 months ago

OpenTripPlanner for R — Peer-reviewed • Rank 13.7 • Science 95%

OpenTripPlanner for R - Published in JOSS (2019)

Scientific Software
Updated 11 months ago

getCRUCLdata — Peer-reviewed • Rank 15.6 • Science 93%

getCRUCLdata: Use and Explore CRU CL v. 2.0 Climatology Elements in R - Published in JOSS (2017)

Scientific Software
Updated 11 months ago

stats19 — Peer-reviewed • Rank 13.6 • Science 95%

stats19: A package for working with open road crash data - Published in JOSS (2019)

Artificial Intelligence and Machine Learning (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

modisfast — Peer-reviewed • Rank 10.4 • Science 98%

modisfast: An R package for fast and efficient access to MODIS, VIIRS and GPM Earth Observation data - Published in JOSS (2024)

Materials Science (40%) Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

gaussplotR — Peer-reviewed • Rank 7.7 • Science 100%

gaussplotR: Fit, Predict and Plot 2D-Gaussians in R - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

unifir — Peer-reviewed • Rank 9.2 • Science 98%

unifir: A Unifying API for Working with Unity in R - Published in JOSS (2022)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

experDesign — Peer-reviewed • Rank 8.6 • Science 98%

experDesign: stratifying samples into batches with minimal bias - Published in JOSS (2021)

Sociology (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

daiquiri — Peer-reviewed • Rank 11.5 • Science 95%

daiquiri: Data Quality Reporting for Temporal Datasets - Published in JOSS (2022)

Scientific Software
Updated 11 months ago

phylogram — Peer-reviewed • Rank 13.3 • Science 93%

phylogram: an R package for phylogenetic analysis with nested lists - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

rcites — Peer-reviewed • Rank 10.9 • Science 95%

rcites: An R package to access the CITES Speciesplus database - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

workloopR — Peer-reviewed • Rank 7.4 • Science 98%

workloopR: Analysis of work loops and other data from muscle physiology experiments in R - Published in JOSS (2019)

Materials Science (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

StormR — Peer-reviewed • Rank 10.2 • Science 95%

StormR: An R package to quantify and map the tropical storms and cyclones’ winds characteristics - Published in JOSS (2024)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

weatherOz — Peer-reviewed • Rank 11.7 • Science 93%

weatherOz: An API Client for Australian Weather and Climate Data Resources in R - Published in JOSS (2024)

Scientific Software
Updated 11 months ago

restez — Peer-reviewed • Rank 11.0 • Science 93%

restez: Create and Query a Local Copy of GenBank in R - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

The jagstargets R package — Peer-reviewed • Rank 10.8 • Science 93%

The jagstargets R package: a reproducible workflow framework for Bayesian data analysis with JAGS - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

tidyqpcr — Peer-reviewed • Rank 5.5 • Science 98%

tidyqpcr: Quantitative PCR analysis in the tidyverse. - Published in JOSS (2022)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

medrxivr — Peer-reviewed • Rank 10.3 • Science 93%

medrxivr: Accessing and searching medRxiv and bioRxiv preprint data in R - Published in JOSS (2020)

Scientific Software
Updated 11 months ago

excluder — Peer-reviewed • Rank 10.1 • Science 93%

excluder: An R package that checks for exclusion criteria in online data - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

geocmeans — Peer-reviewed • Rank 9.8 • Science 93%

geocmeans: An R package for spatial fuzzy c-means - Published in JOSS (2023)

Scientific Software
Updated 11 months ago

bikedata — Peer-reviewed • Rank 6.9 • Science 95%

bikedata - Published in JOSS (2017)

Scientific Software
Updated 11 months ago

tacmagic — Peer-reviewed • Rank 8.4 • Science 93%

tacmagic: Positron emission tomography analysis in R - Published in JOSS (2019)

Scientific Software
Updated 11 months ago

concstats — Peer-reviewed • Rank 8.2 • Science 93%

concstats: Market Structure, Concentration and Inequality Measures, with R - Published in JOSS (2023)

Scientific Software
Updated 11 months ago

coder — Peer-reviewed • Rank 6.2 • Science 93%

coder: An R package for code-based item classification and categorization - Published in JOSS (2020)

Medicine (45%) Materials Science (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

bleiglas — Peer-reviewed • Rank 4.1 • Science 95%

bleiglas: An R package for interpolation and visualisation of spatiotemporal data with 3D tessellation - Published in JOSS (2021)

Agricultural and Biological Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

The stantargets R package — Peer-reviewed • Rank 5.1 • Science 93%

The stantargets R package: a workflow framework for efficient reproducible Stan-powered Bayesian data analysis pipelines - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

fellingdater — Peer-reviewed • Rank 3.6 • Science 93%

fellingdater: a toolkit to estimate, report and combine felling dates derived from historical tree-ring series - Published in JOSS (2024)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

sdmbench — Peer-reviewed • Rank 3.0 • Science 93%

sdmbench: R package for benchmarking species distribution models - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

SymbiotaR2 — Peer-reviewed • Rank 2.7 • Science 93%

SymbiotaR2: An R Package for Accessing Symbiota2 Data - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Updated 11 months ago

traits • Rank 18.4 • Science 77%

R package for accessing species trait data from multiple databases

Scientific Software
Updated 11 months ago

whalestrike — Peer-reviewed • Rank 1.8 • Science 93%

whalestrike: An R package for simulating ship strikes on whales - Published in JOSS (2024)

Scientific Software · Peer-reviewed
Updated 11 months ago

datefixR • Rank 12.5 • Science 77%

🗓 Standardize messy date data into consistent, machine-readable, formats

Updated 11 months ago

biorad • Rank 7.6 • Science 77%

R package for analysis and visualisation of biological signals in weather radar data

Updated 11 months ago

spatsoc • Rank 15.0 • Science 67%

:package: spatsoc is an R package for detecting spatial and temporal groups in GPS relocations.

Scientific Software
Updated 11 months ago

gigs — Peer-reviewed • Rank 4.0 • Science 77%

gigs: A package for standardising fetal, neonatal, and child growth assessment - Published in JOSS (2025)

Scientific Software · Peer-reviewed
Updated 11 months ago

frictionless • Rank 13.9 • Science 67%

R package to read and write Frictionless Data Packages

Updated 11 months ago

movepub • Rank 3.0 • Science 77%

R package to prepare animal tracking data from Movebank for publication in a research repository, GBIF or OBIS

Updated 11 months ago

impindicator • Rank 2.7 • Science 77%

Compute impact indicators of invasive alien species

Updated 11 months ago

maptiles • Rank 16.6 • Science 62%

Download, compose and display map tiles with R

Scientific Software
Updated 11 months ago

RefManageR — Peer-reviewed • Rank 19.2 • Science 59%

RefManageR: Import and Manage BibTeX and BibLaTeX References in R - Published in JOSS (2017)

Scientific Software · Peer-reviewed
Updated 11 months ago

augmentedRCBD • Rank 10.7 • Science 67%

Analysis of Augmented Randomised Complete Block Design

Updated 11 months ago

FedData • Rank 18.4 • Science 59%

Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources

Updated 11 months ago

waywiser • Rank 10.3 • Science 67%

Ergonomic tooling to assess models of spatial data

Updated 11 months ago

RNeXML • Rank 17.8 • Science 59%

Implementing semantically rich NeXML I/O in R

Updated 11 months ago

taxizedb • Rank 17.5 • Science 59%

Tools for Working with Taxonomic SQL Databases

Updated 11 months ago

datapackager • Rank 13.8 • Science 59%

An R package to enable reproducible data processing, packaging and sharing.

Scientific Software
Updated 11 months ago

lightr — Peer-reviewed • Rank 13.4 • Science 59%

lightr: import spectral data and metadata in R - Published in JOSS (2019)

Updated 11 months ago

tidyBdE • Rank 15.0 • Science 57%

R package that helps to retrieve data from Banco de España

Updated 11 months ago

rnpn • Rank 17.9 • Science 54%

R client for the National Phenology Network database API

Updated 11 months ago

TreeDist • Rank 12.8 • Science 59%

Calculate distances between phylogenetic trees in R

Updated 11 months ago

MTA • Rank 9.6 • Science 62%

Multiscalar Territorial Analysis

Updated 11 months ago

valh • Rank 8.7 • Science 62%

Interface between R and the OpenStreetMap-based routing service Valhalla

Updated 11 months ago

mapSpain • Rank 13.1 • Science 57%

R package with the administrative boundaries of Spain, including CCAA, provinces and municipalities

Updated 11 months ago

nominatimlite • Rank 11.9 • Science 57%

Lite interface for getting data from OSM geocoder service.

Updated 11 months ago

rfishbase • Rank 19.6 • Science 49%

R interface to the fishbase.org database

Updated 11 months ago

CatastRo • Rank 11.2 • Science 57%

R package to query Sede Electrónica del Catastro (Spain)

Updated 11 months ago

linemap • Rank 5.4 • Science 62%

Create maps made of (ridge) lines

Updated 11 months ago

BaseSet • Rank 10.4 • Science 57%

Provides classes for working with sets

Updated 11 months ago

rasterpic • Rank 10.0 • Science 57%

Convert digital images into georeferenced rasters

Updated 11 months ago

lingtypology • Rank 18.0 • Science 49%

R package for linguistic cartography and typological databases search

Updated 11 months ago

igor • Rank 9.5 • Science 57%

R package to extract information from the Intergovernmental Organizations ('IGO') Database , version 3, provided by the Correlates of War Project https://correlatesofwar.org/

Updated 11 months ago

arcgeocoder • Rank 9.3 • Science 57%

Lite interface for geocoding with ArcGIS REST API

Updated 11 months ago

arkdb • Rank 17.2 • Science 49%

Archive and unarchive databases as flat text files

Updated 11 months ago

nlmr • Rank 7.2 • Science 59%

📦 R package to simulate neutral landscape models 🏔

Updated 11 months ago

resmush • Rank 8.6 • Science 57%

Compress local and online images using the reSmush.it API service https://resmush.it/

Updated 11 months ago

rdhs • Rank 6.5 • Science 59%

API Client and Data Munging for the Demographic and Health Survey Data