Projects

Updated 6 months ago

compoda • Rank 3.3 • Science 67%

Simplex space operations for compositional data implemented in Python.

barycentric-coordinates compositional-data compositional-data-analysis n-simplex simplex simplex-space simplices

Updated 6 months ago

multilevelcoda • Rank 10.3 • Science 49%

multilevelcoda R package for Bayesian multilevel compositional data analysis

bayesian-inference compositional-data-analysis multilevel-models multilevelcoda r r-package

Updated 5 months ago

https://github.com/biocore/gemelli • Rank 12.2 • Science 46%

Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.

compositional-data-analysis ctf joint-rpca microbiome qiime2 rclr rpca tempted

Updated 6 months ago

https://github.com/juliaearth/coda.jl • Rank 6.1 • Science 26%

Compositional data analysis in Julia

coda compositional-data compositional-data-analysis compositions simplex statistics

Updated 6 months ago

codaredistlm • Rank 2.9 • Science 23%

Functions to analyse compositional data and produce confidence intervals for relative increases and decreases in the compositional components

coda compositional-data-analysis isometric-log-ratio multiple-linear-regression plotting prediction

ecosyste.ms

Data

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Experiments

Open Source Science

compoda • Rank 3.3 • Science 67%

multilevelcoda • Rank 10.3 • Science 49%

https://github.com/biocore/gemelli • Rank 12.2 • Science 46%

https://github.com/juliaearth/coda.jl • Rank 6.1 • Science 26%

codaredistlm • Rank 2.9 • Science 23%