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Open Source Science

Updated 10 months ago

compoda • Rank 3.3 • Science 67%

Simplex space operations for compositional data implemented in Python.

Updated 10 months ago

multilevelcoda • Rank 10.3 • Science 49%

multilevelcoda R package for Bayesian multilevel compositional data analysis

Updated 10 months ago

https://github.com/biocore/gemelli • Rank 12.2 • Science 46%

Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.

Updated 10 months ago

codaredistlm • Rank 2.9 • Science 23%

Functions to analyse compositional data and produce confidence intervals for relative increases and decreases in the compositional components