Scientific Software
Updated 6 months ago

lifelines — Peer-reviewed • Rank 27.3 • Science 100%

lifelines: survival analysis in Python - Published in JOSS (2019)

Scientific Software
Updated 6 months ago

Intracranial Electrode Location and Analysis in MNE-Python — Peer-reviewed • Rank 26.8 • Science 100%

Intracranial Electrode Location and Analysis in MNE-Python - Published in JOSS (2022)

Scientific Software
Updated 6 months ago

imodels — Peer-reviewed • Rank 21.0 • Science 100%

imodels: a python package for fitting interpretable models - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

pyhf — Peer-reviewed • Rank 19.4 • Science 100%

pyhf: pure-Python implementation of HistFactory statistical models - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

Pingouin — Peer-reviewed • Rank 23.6 • Science 95%

Pingouin: statistics in Python - Published in JOSS (2018)

Engineering Earth and Environmental Sciences (40%) Economics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

PreliZ — Peer-reviewed • Rank 17.8 • Science 98%

PreliZ: A tool-box for prior elicitation - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

TextDescriptives — Peer-reviewed • Rank 17.6 • Science 98%

TextDescriptives: A Python package for calculating a large variety of metrics from text - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

PyAutoFit — Peer-reviewed • Rank 15.2 • Science 100%

PyAutoFit: A Classy Probabilistic Programming Language for Model Composition and Fitting - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

scikit-posthocs — Peer-reviewed • Rank 20.2 • Science 95%

scikit-posthocs: Pairwise multiple comparison tests in Python - Published in JOSS (2019)

Economics
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

effectsize — Peer-reviewed • Rank 20.1 • Science 95%

effectsize: Estimation of Effect Size Indices and Standardized Parameters - Published in JOSS (2020)

Scientific Software
Updated 6 months ago

performance — Peer-reviewed • Rank 21.8 • Science 93%

performance: An R Package for Assessment, Comparison and Testing of Statistical Models - Published in JOSS (2021)

Engineering (40%) Earth and Environmental Sciences (40%) Economics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

volesti — Peer-reviewed • Rank 14.6 • Science 98%

volesti: A C++ library for sampling and volume computation on convex bodies - Published in JOSS (2025)

Scientific Software
Updated 6 months ago

see — Peer-reviewed • Rank 19.0 • Science 93%

see: An R Package for Visualizing Statistical Models - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

OnlineStats.jl — Peer-reviewed • Rank 16.8 • Science 95%

OnlineStats.jl: A Julia package for statistics on data streams - Published in JOSS (2020)

Scientific Software
Updated 6 months ago

Frites — Peer-reviewed • Rank 11.5 • Science 100%

Frites: A Python package for functional connectivity analysis and group-level statistics of neurophysiological data - Published in JOSS (2022)

Scientific Software
Updated 6 months ago

piecewise-regression (aka segmented regression) in Python — Peer-reviewed • Rank 17.7 • Science 93%

piecewise-regression (aka segmented regression) in Python - Published in JOSS (2021)

Economics Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

BioPsyKit — Peer-reviewed • Rank 12.6 • Science 98%

BioPsyKit: A Python package for the analysis of biopsychological data - Published in JOSS (2021)

Economics Earth and Environmental Sciences Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

VeridicalFlow — Peer-reviewed • Rank 10.4 • Science 100%

VeridicalFlow: a Python package for building trustworthy data science pipelines with PCS - Published in JOSS (2022)

Scientific Software
Updated 6 months ago

HiddenMarkovModels.jl — Peer-reviewed • Rank 9.4 • Science 100%

HiddenMarkovModels.jl: generic, fast and reliable state space modeling - Published in JOSS (2024)

Engineering (31%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

bayes-toolbox — Peer-reviewed • Rank 10.4 • Science 98%

bayes-toolbox: A Python package for Bayesian statistics - Published in JOSS (2023)

Earth and Environmental Sciences Economics
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

Reducing the efforts to create reproducible analysis code with FieldTrip — Peer-reviewed • Rank 12.3 • Science 95%

Reducing the efforts to create reproducible analysis code with FieldTrip - Published in JOSS (2024)

Scientific Software
Updated 6 months ago

kalepy — Peer-reviewed • Rank 12.1 • Science 95%

kalepy: a Python package for kernel density estimation, sampling and plotting - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

The psycho Package — Peer-reviewed • Rank 14.0 • Science 93%

The psycho Package: an Efficient and Publishing-Oriented Workflow for Psychological Science - Published in JOSS (2018)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

rsimsum — Peer-reviewed • Rank 11.5 • Science 95%

rsimsum: Summarise results from Monte Carlo simulation studies - Published in JOSS (2018)

Physics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

Contextualized — Peer-reviewed • Rank 11.4 • Science 95%

Contextualized: Heterogeneous Modeling Toolbox - Published in JOSS (2024)

Sociology Engineering (40%) Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

piar — Peer-reviewed • Rank 8.1 • Science 98%

piar: Price Index Aggregation in R - Published in JOSS (2024)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

rempsyc — Peer-reviewed • Rank 5.9 • Science 100%

rempsyc: Convenience functions for psychology - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

PyUnfold — Peer-reviewed • Rank 10.7 • Science 95%

PyUnfold: A Python package for iterative unfolding - Published in JOSS (2018)

Mathematics (32%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

lfda — Peer-reviewed • Rank 12.7 • Science 93%

lfda: Local Fisher Discriminant Analysis in R - Published in JOSS (2019)

Scientific Software
Updated 6 months ago

dml — Peer-reviewed • Rank 12.3 • Science 93%

dml: Distance Metric Learning in R - Published in JOSS (2018)

Scientific Software
Updated 6 months ago

lavaanExtra — Peer-reviewed • Rank 4.9 • Science 100%

lavaanExtra: Convenience Functions for Package lavaan - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

popsynth — Peer-reviewed • Rank 9.8 • Science 95%

popsynth: A generic astrophysical population synthesis framework - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

autoplotly — Peer-reviewed • Rank 11.7 • Science 93%

autoplotly: An R package for automatic generation of interactive visualizations for statistical results - Published in JOSS (2018)

Scientific Software
Updated 6 months ago

txshift — Peer-reviewed • Rank 9.6 • Science 95%

txshift: Efficient estimation of the causal effects of stochastic interventions in R - Published in JOSS (2020)

Scientific Software
Updated 6 months ago

hoggorm — Peer-reviewed • Rank 11.0 • Science 93%

hoggorm: a python library for explorative multivariate statistics - Published in JOSS (2019)

Scientific Software
Updated 6 months ago

Hypothesize — Peer-reviewed • Rank 11.0 • Science 93%

Hypothesize: Robust Statistics for Python - Published in JOSS (2020)

Scientific Software
Updated 6 months ago

The jagstargets R package — Peer-reviewed • Rank 10.8 • Science 93%

The jagstargets R package: a reproducible workflow framework for Bayesian data analysis with JAGS - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

A Short Introduction to PF — Peer-reviewed • Rank 5.6 • Science 98%

A Short Introduction to PF: A C++ Library for Particle Filtering - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

Statmanager-kr — Peer-reviewed • Rank 10.3 • Science 93%

Statmanager-kr: A User-friendly Statistical Package for Python in Pandas - Published in JOSS (2024)

Updated 4 months ago

pyMultiFit: A Python library for fitting data with multiple models • Rank 8.9 • Science 93%

pyMultiFit: A Python library for fitting data with multiple models - Published in JOSS (2025)

Scientific Software
Updated 6 months ago

MarSwitching.jl — Peer-reviewed • Rank 3.7 • Science 98%

MarSwitching.jl: A Julia package for Markov switching dynamic models - Published in JOSS (2024)

Earth and Environmental Sciences
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

tacmagic — Peer-reviewed • Rank 8.4 • Science 93%

tacmagic: Positron emission tomography analysis in R - Published in JOSS (2019)

Scientific Software
Updated 6 months ago

PRDA — Peer-reviewed • Rank 8.3 • Science 93%

PRDA: An R package for Prospective and Retrospective Design Analysis - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

flusight — Peer-reviewed • Rank 5.9 • Science 95%

flusight: interactive visualizations for infectious disease forecasts - Published in JOSS (2017)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

lintsampler — Peer-reviewed • Rank 7.5 • Science 93%

lintsampler: Easy random sampling via linear interpolation - Published in JOSS (2024)

Scientific Software
Updated 6 months ago

wbacon — Peer-reviewed • Rank 7.5 • Science 93%

wbacon: Weighted BACON algorithms for multivariate outlier nomination (detection) and robust linear regression - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Updated 6 months ago

Distributions • Rank 22.9 • Science 77%

A Julia package for probability distributions and associated functions.

Scientific Software
Updated 6 months ago

latentcor — Peer-reviewed • Rank 4.4 • Science 95%

latentcor: An R Package for estimating latent correlations from mixed data types - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

pfla — Peer-reviewed • Rank 6.3 • Science 93%

pfla: A Python Package for Dental Facial Analysis using Computer Vision and Statistical Shape Analysis - Published in JOSS (2018)

Scientific Software
Updated 6 months ago

SuperNOVA — Peer-reviewed • Rank 4.2 • Science 95%

SuperNOVA: Semi-Parametric Identification and Estimation of Interaction and Effect Modification in Mixed Exposures using Stochastic Interventions in R - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

CVtreeMLE — Peer-reviewed • Rank 3.9 • Science 95%

CVtreeMLE: Efficient Estimation of Mixed Exposures using Data Adaptive Decision Trees and Cross-Validated Targeted Maximum Likelihood Estimation in R - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

plotastic — Peer-reviewed • Rank 5.3 • Science 93%

plotastic: Bridging Plotting and Statistics in Python - Published in JOSS (2024)

Scientific Software
Updated 6 months ago

The stantargets R package — Peer-reviewed • Rank 5.1 • Science 93%

The stantargets R package: a workflow framework for efficient reproducible Stan-powered Bayesian data analysis pipelines - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

StatAid — Peer-reviewed • Rank 2.6 • Science 95%

StatAid: An R package with a graphical user interface for data analysis - Published in JOSS (2020)

Engineering (40%) Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

biotmle — Peer-reviewed • Rank 4.0 • Science 93%

biotmle: Targeted Learning for Biomarker Discovery - Published in JOSS (2017)

Scientific Software
Updated 6 months ago

gmm_diag and gmm_full — Peer-reviewed • Rank 2.4 • Science 93%

gmm_diag and gmm_full: C++ classes for multi-threaded Gaussian mixture models and Expectation-Maximisation - Published in JOSS (2017)

Updated 6 months ago

tableone • Rank 17.9 • Science 77%

Create "Table 1" for research papers in Python

Updated 6 months ago

geostatspy • Rank 16.5 • Science 77%

GeostatsPy Python package for spatial data analytics and geostatistics. Started as a reimplementation of GSLIB, Geostatistical Library (Deutsch and Journel, 1992) from Fortran to Python, Geostatistics in a Python package. Now with many additional methods. I hope this resources is helpful, Prof. Michael Pyrcz

Scientific Software
Updated 6 months ago

miet — Peer-reviewed • Rank 1.4 • Science 89%

miet: an R package for region of interest analysis from magnetic reasonance images - Published in JOSS (2020)

Engineering
Scientific Software · Peer-reviewed
Updated 6 months ago

multinma • Rank 12.8 • Science 77%

Network meta-analysis of individual and aggregate data in Stan

Updated 6 months ago

lumin • Rank 10.4 • Science 77%

LUMIN - a deep learning and data science ecosystem for high-energy physics.

Updated 6 months ago

gstools • Rank 18.2 • Science 67%

GSTools - A geostatistical toolbox: random fields, variogram estimation, covariance models, kriging and much more

Updated 6 months ago

dcor • Rank 17.5 • Science 67%

Distance correlation and related E-statistics in Python

Updated 6 months ago

mne-connectivity • Rank 17.8 • Science 64%

Connectivity algorithms that leverage the MNE-Python API.

Scientific Software
Updated 6 months ago

GeoStats.jl -- High-performance geostatistics in Julia — Peer-reviewed • Rank 13.2 • Science 67%

GeoStats.jl -- High-performance geostatistics in Julia - Published in JOSS (2018)

Updated 6 months ago

arkhe • Rank 3.0 • Science 77%

Tools for cleaning rectangular data - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/arkhe

Updated 5 months ago

sjPlot • Rank 21.0 • Science 59%

sjPlot - Data Visualization for Statistics in Social Science

Updated 6 months ago

asreview-insights • Rank 12.3 • Science 67%

Tools such as plots and metrics to analyze (simulated) reviews for ASReview LAB

Updated 6 months ago

fcpy • Rank 1.8 • Science 75%

Feldman-Cousins Confidence Interval Calculation

Updated 5 months ago

VineCopula • Rank 17.8 • Science 59%

Statistical inference of vine copulas

Updated 6 months ago

gpindex • Rank 8.7 • Science 67%

An R package for calculating generalized price and quantity indexes

Updated 6 months ago

sps • Rank 8.1 • Science 67%

An R package for sequential Poisson sampling

Updated 6 months ago

pysps • Rank 6.6 • Science 67%

Sequential Poisson sampling in Python