PyVista — Peer-reviewed • Rank 27.2 • Science 95%

PyVista: 3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK) - Published in JOSS (2019)

CMasher — Peer-reviewed • Rank 19.0 • Science 98%

CMasher: Scientific colormaps for making accessible, informative and 'cmashing' plots - Published in JOSS (2020)

corner.py — Peer-reviewed • Rank 21.8 • Science 95%

corner.py: Scatterplot matrices in Python - Published in JOSS (2016)

see — Peer-reviewed • Rank 19.0 • Science 93%

see: An R Package for Visualizing Statistical Models - Published in JOSS (2021)

Sciris — Peer-reviewed • Rank 16.4 • Science 95%

Sciris: Simplifying scientific software in Python - Published in JOSS (2023)

tidyHeatmap — Peer-reviewed • Rank 15.5 • Science 95%

tidyHeatmap: an R package for modular heatmap production based on tidy principles - Published in JOSS (2020)

planetMagFields — Peer-reviewed • Rank 9.3 • Science 100%

planetMagFields: A Python package for analyzing and plotting planetary magnetic field data - Published in JOSS (2024)

LobsterPy — Peer-reviewed • Rank 15.3 • Science 93%

LobsterPy: A package to automatically analyze LOBSTER runs - Published in JOSS (2024)

gaussplotR — Peer-reviewed • Rank 7.7 • Science 100%

gaussplotR: Fit, Predict and Plot 2D-Gaussians in R - Published in JOSS (2021)

ThermoParser — Peer-reviewed • Rank 6.3 • Science 100%

ThermoParser: Streamlined Analysis of Thermoelectric Properties - Published in JOSS (2024)

PolarToolkit — Peer-reviewed • Rank 12.1 • Science 93%

PolarToolkit: Python Tools for Convenient, Reproducible, and Open Polar Science - Published in JOSS (2024)

Plots • Rank 24.1 • Science 77%

Powerful convenience for Julia visualizations and data analysis

Makie.jl — Peer-reviewed • Rank 23.8 • Science 77%

Makie.jl: Flexible high-performance data visualization for Julia - Published in JOSS (2021)

napari-clusters-plotter • Rank 13.5 • Science 85%

A napari plugin for clustering objects according to their properties.

plotastic — Peer-reviewed • Rank 5.3 • Science 93%

plotastic: Bridging Plotting and Statistics in Python - Published in JOSS (2024)

itrm — Peer-reviewed • Rank 8.0 • Science 89%

itrm: Interactive Terminal Utilities - Published in JOSS (2024)

matplotlib • Rank 39.1 • Science 54%

matplotlib: plotting with Python

plotnine • Rank 28.7 • Science 64%

A Grammar of Graphics for Python

mplhep • Rank 22.6 • Science 64%

Extended histogram plotting on top of matplotlib and HEP collaboration compatible styling

UnfoldMakie • Rank 8.4 • Science 77%

Plotting and visualization tools for EEG data, with additional Unfold.jl regression ERP methods. Based on the visualization libraries Makie.jl and AlgebraOfGraphics.jl

xpdlines • Rank 6.1 • Science 77%

A program for plotting powder diffraction patterns and background subtraction

mpmath • Rank 16.9 • Science 64%

Python library for arbitrary-precision floating-point arithmetic

https://github.com/silx-kit/silx • Rank 21.2 • Science 59%

silx toolkit

sjPlot • Rank 21.0 • Science 59%

sjPlot - Data Visualization for Statistics in Social Science

cplot • Rank 11.6 • Science 67%

:rainbow: Plot complex functions

eomaps • Rank 15.3 • Science 59%

A library to create interactive maps of geographical datasets

pROC • Rank 24.7 • Science 49%

Display and analyze ROC curves in R

cloupy • Rank 6.7 • Science 67%

CLOUPY IS NO LONGER SUPPORTED. PLEASE, SEE README. cloupy is a Python library for climatological data downloading, processing and visualizing. The main goal of the library is to help its author in writing a BA thesis. The library is well adapted to academic work - used data sources are reliable and graphs are easy to modify.

https://github.com/bokeh/bokeh • Rank 36.3 • Science 36%

Interactive Data Visualization in the browser, from Python

napari-time-series-plotter • Rank 5.2 • Science 67%

A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.

xpressplot • Rank 4.7 • Science 67%

A toolkit for navigating and analyzing gene expression datasets

interactive_data_editor • Rank 4.6 • Science 67%

A Software to interactively edit data in a graphical manner

flopy • Rank 20.6 • Science 49%

A Python package to create, run, and post-process MODFLOW-based models.

sumo — Peer-reviewed • Rank 8.8 • Science 59%

sumo: Command-line tools for plotting and analysis of periodic *ab initio* calculations - Published in JOSS (2018)

ode-test-problems • Rank 5.6 • Science 62%

A MATLAB suite of initial value problems

pyjams • Rank 8.5 • Science 59%

A general Python package with miscellaneous utility functions used in several other packages.

https://github.com/holoviz/holoviews • Rank 30.1 • Science 36%

With Holoviews, your data visualizes itself.

fgivenx — Peer-reviewed • Rank 5.5 • Science 59%

fgivenx: A Python package for functional posterior plotting - Published in JOSS (2018)

https://github.com/holoviz/hvplot • Rank 28.0 • Science 36%

A high-level plotting API for pandas, dask, xarray, and networkx built on HoloViews

FerriteViz • Rank 9.7 • Science 54%

Plot your Ferrite.jl data

vioplot • Rank 17.4 • Science 44%

Development version of vioplot R package (CRAN maintainer)

PlotTools • Rank 11.5 • Science 49%

Tools for plotting with base R

metpy • Rank 23.4 • Science 36%

MetPy is a collection of tools in Python for reading, visualizing and performing calculations with weather data.

orange3 • Rank 23.4 • Science 36%

🍊 :bar_chart: :bulb: Orange: Interactive data analysis

matplotlib-venn • Rank 22.0 • Science 36%

Area-weighted venn-diagrams for Python/matplotlib

https://github.com/reiinakano/scikit-plot • Rank 10.4 • Science 46%

An intuitive library to add plotting functionality to scikit-learn objects.

vfo • Rank 11.3 • Science 44%

Visualization For OpenSees

Ternary • Rank 15.5 • Science 36%

Create ternary plots in R

swizz • Rank 7.4 • Science 44%

Modular Python package for simple visualization and ML pipelines.

https://github.com/oxyplot/oxyplot • Rank 27.8 • Science 23%

A cross-platform plotting library for .NET

https://github.com/sefffal/pairplots.jl • Rank 12.9 • Science 36%

Beautiful and flexible vizualizations of high dimensional data

brainplotlib • Rank 7.5 • Science 41%

A lightweight package to plot brain surfaces with Python.

toytree • Rank 10.5 • Science 36%

A minimalist tree plotting library using toyplot graphs

pandastable • Rank 17.6 • Science 26%

Table analysis in Tkinter using pandas DataFrames.

https://github.com/aenarete/controlplots.jl • Rank 7.0 • Science 36%

Easy to use plotting for control engineers and students

https://github.com/bendichter/brokenaxes • Rank 19.4 • Science 23%

Create matplotlib plots with broken axes

https://github.com/pdlporters/pdl-graphics-plplot • Rank 4.3 • Science 36%

https://github.com/ckjellson/textalloc • Rank 12.9 • Science 26%

Allocates text labels in matplotlib

https://github.com/janosh/matterviz • Rank 12.8 • Science 26%

Interactive browser visualizations for materials science: periodic tables, 3d crystal structures, MD trajectories, heatmaps, scatter plots, histograms.

pydtmc • Rank 13.6 • Science 23%

A library for discrete-time Markov chains analysis.

pyglotaran-extras • Rank 9.8 • Science 26%

Extra batteries to super-charge pyglotaran's plotting capabilities.

ggghost • Rank 9.2 • Science 26%

:ghost: Capture the spirit of your ggplot call

sunburst • Rank 8.5 • Science 26%

Draw sunburst charts/hierarchical pie plots ("multi-level" pie plots of hierarchical data as e.g., in disk usage diagrams)

https://github.com/h2oai/nitro-altair • Rank 7.6 • Science 26%

Altair plugin for H2O Nitro

phonR • Rank 10.4 • Science 23%

tools for phoneticians and phonologists

ggthemes • Rank 23.4 • Science 10%

Additional themes, scales, and geoms for ggplot2

https://github.com/shitohana/BSXplorer • Rank 6.9 • Science 26%

Comprehensive tool for visualizing genome-wide cytosine data.

https://github.com/benjaminleroy/cowpatch • Rank 5.8 • Science 26%

pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch

sciplot • Rank 8.0 • Science 23%

Format Matplotlib scientific plots

tweenr • Rank 20.6 • Science 10%

Interpolate your data

gis4wrf • Rank 7.0 • Science 23%

QGIS toolkit 🧰 for pre- and post-processing 🔨, visualizing 🔍, and running simulations 💻 in the Weather Research and Forecasting (WRF) model 🌀

codaredistlm • Rank 2.9 • Science 23%

Functions to analyse compositional data and produce confidence intervals for relative increases and decreases in the compositional components

ipyvolume • Rank 15.9 • Science 10%

3d plotting for Python in the Jupyter notebook based on IPython widgets using WebGL

plotGrouper • Rank 13.5 • Science 10%

A shiny app-based GUI wrapper for ggplot2 with built-in statistical analysis.

https://github.com/aminnj/yahist • Rank 10.4 • Science 13%

1D and 2D histogram objects

geneview • Rank 9.8 • Science 13%

Genomics data visualization in Python by using matplotlib.

pyprocessmacro • Rank 11.2 • Science 10%

A Python library for moderation, mediation and conditional process analysis.

https://github.com/mithi/bare-minimum-2d • Rank 7.8 • Science 13%

An extremely lightweight React component to declaratively (and elegantly) plot shapes on an inline SVG

https://github.com/ccampjr/sciplot-pyqt • Rank 9.1 • Science 10%

A Matplotlib-wrapped user-interface for creating and editing publication-ready images and plots

https://github.com/arcticsnow/snowpyt • Rank 7.6 • Science 10%

Python package to load, manipulate and plot snowpit data.

https://github.com/iniceice88/oxyplot-js • Rank 3.8 • Science 13%

https://github.com/1313e/e13tools • Rank 2.6 • Science 13%

A collection of utility functions

https://github.com/zgana/histlite • Rank 1.8 • Science 13%

A somewhat "lite" histogram library

https://github.com/const-ae/motif_plotter • Rank 1.6 • Science 13%

A simple tool to create DNA motif plots based directly on matplotlib to enable construction of complex plots

qplots • Rank 4.1 • Science 10%

Small plotting library for python.

starplot • Science 44%

✨ Star charts and maps in Python

https://github.com/scinim/nim-plotly • Science 13%

plotly wrapper for nim-lang

mcplot • Science 49%

A Python package with a plotting class and routines for publication-ready graphics

https://github.com/jhidding/gnuplotlite.jl • Science 26%

Responsive and composable no-nonsense interface to Gnuplot

piw • Science 67%

Potsdam Interactive Webapp (PIW) framework library

mesa-explorer • Science 44%

Web-based visualization tool for the MESA simulations of stars. Built with Bootstrap 5.3 and d3 v7.8.4

wally • Science 49%

Wally: Visualization of aligned sequencing reads and contigs

proudpalettes.jl • Science 31%

colour palettes derived from pride flags

thermomag_plotter • Science 67%

A basic Python script to plot thermomagnetic data. Made as an exercise for GLY6932 (Data and Software) at University of Florida.

miaViz • Science 26%

Microbiome Analysis Plotting and Visualization

https://github.com/jupyterphysscilab/jupyter-instructortools • Science 23%

Tools for making JupyterPhysSciLab notebook templates for student handouts

geoprofiler • Science 39%

Creates Swath profiles and Distance vs X plots by measuring the accurate distances parallel and perpendicular to user-defined lines

Go-HEP — Peer-reviewed • Science 95%

Go-HEP: libraries for High Energy Physics analyses in Go - Published in JOSS (2017)

ggexpress • Science 44%

ggExpress is the fastest way to create, annotate and and save plots in R.

GNU Data Language 1.0 — Peer-reviewed • Science 95%

GNU Data Language 1.0: a free/libre and open-source drop-in replacement for IDL/PV-WAVE - Published in JOSS (2022)