Updated 11 months ago
scadnano
Python scripting library for generating designs readable by scadnano.
Updated 11 months ago
biologicaltokenizers
Effect of tokenization on transformers for biological sequence
Updated 11 months ago
g4discovery
Pipeline for annotating/predicting G-Quadruplexes (G4s) in a genome sequence, combining pqsfinder and G4Hunter.
Updated 11 months ago
helical
A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.