Updated 9 months ago
biologicaltokenizers
Effect of tokenization on transformers for biological sequence
Updated 9 months ago
helical
A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.
Updated 9 months ago
g4discovery
Pipeline for annotating/predicting G-Quadruplexes (G4s) in a genome sequence, combining pqsfinder and G4Hunter.