Projects

bam-files bioinformatics biojulia biology dna-sequences high-throughput-sequencing sam-files sequence-alignment sequence-analysis smith-waterman-alignment

Updated 9 months ago

https://github.com/biojulia/bio.jl • Rank 11.1 • Science 10%

[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

bioinformatics biojulia biojulia-packages biology deprecated dna genomics

Updated 9 months ago

https://github.com/biojulia/sequencevariation.jl • Rank 4.9 • Science 10%

Biological sequence variation

biojulia biological-sequences biology variant-calling

Updated 9 months ago

https://github.com/biojulia/readdatastores.jl • Rank 4.8 • Science 10%

Datastores for reads, not your papa's FASTQ files.

bam-files bam-format bioinformatics bioinformatics-data biojulia biology fastq fastq-files fastq-format files format genomics genomics-data sam-bam sam-file sam-files sequencing storage

Updated 9 months ago

https://github.com/biojulia/biojuliaregistry • Rank 4.1 • Science 10%

The BioJulia package registry

bioinformatics biojulia biojulia-registry biology julia-packages

Updated 9 months ago

https://github.com/camilogarciabotero/biovossencoder.jl • Science 46%

A small Julia package to represent BioSequences as a Voss matrix

bioinformatics biojulia encoding julia onehot-encoding onehot-vectors wavelets

Updated 9 months ago

https://github.com/camilogarciabotero/biosimplex.jl • Science 46%

Representing BioSequences as Simplex numerical matrix

bioinformatics biojulia biology julia machine-learning

Updated 9 months ago

https://github.com/camilogarciabotero/bioatomscount.jl • Science 46%

Count organic atoms in a BioSequence

atoms bioinformatics biojulia organic

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

Open Source Science

BioStructures • Rank 12.1 • Science 67%

https://github.com/biojulia/fastx.jl • Rank 13.3 • Science 46%

https://github.com/biojulia/xam.jl • Rank 11.1 • Science 46%

https://github.com/biojulia/biosequences.jl • Rank 15.2 • Science 36%

https://github.com/biojulia/biosymbols.jl • Rank 12.7 • Science 36%

https://github.com/biojulia/bioalignments.jl • Rank 12.8 • Science 33%

https://github.com/biojulia/bio.jl • Rank 11.1 • Science 10%

https://github.com/biojulia/sequencevariation.jl • Rank 4.9 • Science 10%

https://github.com/biojulia/readdatastores.jl • Rank 4.8 • Science 10%

https://github.com/biojulia/biojuliaregistry • Rank 4.1 • Science 10%

https://github.com/camilogarciabotero/biovossencoder.jl • Science 46%

https://github.com/camilogarciabotero/biosimplex.jl • Science 46%

https://github.com/camilogarciabotero/bioatomscount.jl • Science 46%