Scientific Software
Updated 9 months ago
musclesyneRgies
musclesyneRgies: factorization of electromyographic data in R with sensible defaults - Published in JOSS (2022)
Updated 9 months ago
sigminer
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
Updated 9 months ago
seqArchR
seqArchR: Identifying (promoter) sequence architectures de novo using NMF
Updated 4 months ago
OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization
OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)
Updated 9 months ago
stnmf
A fast and versatile implementation of spike-triggered non-negative matrix factorization (STNMF) based on accelerated/fast HALS algorithms