Bodge
Bodge: Python package for efficient tight-binding modeling of superconducting nanostructures - Published in JOSS (2024)
diffsol: Rust crate for solving differential equations
diffsol: Rust crate for solving differential equations - Published in JOSS (2026)
BracketingNonlinearSolve
High-performance and differentiation-enabled nonlinear solvers (Newton methods), bracketed rootfinding (bisection, Falsi), with sparsity and Newton-Krylov support.
suitesparse
The official SuiteSparse library: a suite of sparse matrix algorithms authored or co-authored by Tim Davis, Texas A&M University.
coolpuppy
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
ntpoly
A massively parallel library for computing the functions of sparse matrices.
sparsity-pattern
Generate different types of sparsity pattern for sparse matrices.
https://github.com/cpmech/russell
Rust Scientific Libary. ODE and DAE (Runge-Kutta) solvers. Special functions (Bessel, Elliptic, Beta, Gamma, Erf). Linear algebra. Sparse solvers (MUMPS, UMFPACK). Probability distributions. Tensor calculus.
https://github.com/flatironinstitute/sparse_dot
Python wrapper for Intel Math Kernel Library (MKL) matrix multiplication
fast-matrix-market
Fast and full-featured Matrix Market I/O library for C++, Python, and R
FSelectorRcpp
Rcpp (free of Java/Weka) implementation of FSelector entropy-based feature selection algorithms with a sparse matrix support
https://github.com/conradsnicta/armadillo-code
Armadillo: fast C++ library for linear algebra & scientific computing - https://arma.sourceforge.net
SPbLA
SPbLA: The Library of GPGPU-powered Sparse Boolean Linear Algebra Operations - Published in JOSS (2022)
OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization
OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)
OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis
OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)
CompressedSparseBlocks
A Julia interface (wrapper) to the Compressed Sparse Blocks (CSB) library.
graphcompression
A new set of lossy and lossless graph compression techniques for external memory representation.