Projects

Updated 6 months ago

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

annotation bacteria bacterial-genomes bioinformatics genome-annotation mag metagenome-assembled-genomes microbial-genomics plasmids

Updated 6 months ago

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

assembly bacteria bioinformatics contigs microbiology ngs plasmids wgs

Updated 6 months ago

MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies

assemblies clustering host-range plasmids typing

Updated 6 months ago

a DNA assembly library

annotation dna-assembly picklist plasmids protocols robotics seqrecord

Updated 6 months ago

Targeted Detection and Reconstruction of Plasmids

bacteria plasmids wgs

Updated 6 months ago

Modular cloning simulation with the MoClo framework in Python

bioinformatics biopython moclo modular-cloning plasmids system-biology

Updated 6 months ago

Software for prediction of plasmid sequences in metagenomic assemblies

classification contigs fasta metagenome metagenome-assembly metagenomes plasflow plasmid plasmid-sequences plasmids prediction tensorflow

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