aviary-genome • Rank 12.4 • Science 77%

A hybrid assembly and MAG recovery pipeline (and more!)

viralrecon • Rank 8.4 • Science 77%

Assembly and intrahost/low-frequency variant calling for viral samples

jcvi • Rank 16.7 • Science 67%

Python library to facilitate genome assembly, annotation, and comparative genomics

asap • Rank 6.4 • Science 77%

A scalable bacterial genome assembly, annotation and analysis pipeline

mag • Rank 9.5 • Science 67%

Assembly and binning of metagenomes

bacass • Rank 7.5 • Science 67%

Simple bacterial assembly and annotation pipeline

funcscan • Rank 7.4 • Science 67%

(Meta-)genome screening for functional and natural product gene sequences

drep • Rank 14.3 • Science 59%

Rapid comparison and dereplication of genomes

mikrokondo • Rank 4.5 • Science 67%

A simple pipeline for bacterial assembly and quality control

cb-platon • Rank 10.4 • Science 59%

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

nanite • Rank 1.6 • Science 67%

A streamlined Oxford Nanopore Viral Metagenomics Pipeline

https://github.com/compas-dev/compas_xr • Rank 3.8 • Science 59%

COMPAS XR streamlines extended reality workflows to ease the implementation of human-machine collaborative applications in architectural research and educational environments.

pwntools • Rank 26.8 • Science 36%

CTF framework and exploit development library

metagenome-atlas • Rank 12.6 • Science 49%

ATLAS - Three commands to start analyzing your metagenome data

pathogenseq • Rank 3.0 • Science 57%

Pathogen whole genome sequence (WGS) data analysis pipeline

pyfastx • Rank 18.1 • Science 36%

a python package for fast random access to sequences from plain and gzipped FASTA/Q files

et-3400-simulator • Rank 8.6 • Science 44%

A browser-based interactive simulator for the Heathkit® ET-3400 Microprocessor Trainer.

https://github.com/ashvardanian/simsimd • Rank 25.6 • Science 26%

Up to 200x Faster Dot Products & Similarity Metrics — for Python, Rust, C, JS, and Swift, supporting f64, f32, f16 real & complex, i8, and bit vectors using SIMD for both AVX2, AVX-512, NEON, SVE, & SVE2 📐

@stdlib/assert-has-wasm-support • Rank 7.4 • Science 44%

Detect native WebAssembly support.

ipyrad • Rank 9.4 • Science 36%

Interactive assembly and analysis of RAD-seq data sets

https://github.com/0xade1a1de/assemblyline • Rank 7.5 • Science 36%

A C library and binary for generating machine code of x86_64 assembly language and executing on the fly without invoking another compiler, assembler or linker.

genomeannotator • Rank 3.6 • Science 26%

Pipeline for the identification of (coding) gene structures in draft genomes.

tiny-x86-os • Rank 3.5 • Science 26%

💽 A simple Intel x86 operating system written in assembly and C++, supporting interrupts, memory paging and heap allocation, disk control, file partition, system calls, thread scheduling, etc.（使用C++和汇编开发的简易Intel x86操作系统，支持中断、内存分页、堆内存管理、磁盘控制、文件分区、系统调用、线程调度等功能。）

bioinformatics-toolbox • Science 57%

Docker container for bioinformatics tools and pipelines

https://github.com/ashrithsagar/microcontroller-lab • Science 13%

Micro Controller Lab, Intel 8051 Assembly language

https://github.com/cedrickchee/nand2tetris • Science 13%

Solutions for http://www.nand2tetris.org/

seanslifearchive_images_battery • Science 26%

The module for my life story project that contains my battery image collection

assemblebac-ont • Science 67%

avantonder/assembleBAC-ONT is a bioinformatics pipeline that de novo assembles and annotates Oxford Nanopore (ONT) long-read sequence data.

assemblebac • Science 67%

avantonder/assembleBAC is a bioinformatics best-practise analysis pipeline for assembling and annotating bacterial genomes.

metavirs • Science 67%

Viral Metagenomics Assembly and Annotation Pipeline

redundans • Science 49%

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

genome-assessment-post-assembly • Science 57%

assemblyqc • Science 57%

A Nextflow pipeline for evaluating assembly quality

https://github.com/daskol/spinlock • Science 13%

Spinlock implementation in Go and inline assembler.

hybridassembly • Science 54%

Hybrid de novo assembly pipeline for whole-genome human datasets

pacbio-hifi-genome-assembly-using-hifiasm • Science 57%

Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.

https://github.com/dineshpinto/stm32f4 • Science 13%

Combining an FPGA, µC and AWG for nanosecond photon counting

likwid • Science 59%

Performance monitoring and benchmarking suite

tinykernel • Science 44%

Tiny Kernel is a work in progress Operating System kernel.

https://github.com/brentp/falas • Science 13%

Fragment-Aware Local Assembly for Short-reads

cs-my-thesis-scip • Science 26%

My Computer Science Bachelor's Degree Thesis.

https://github.com/felipenlunkes/mips-asm • Science 13%

MIPS Assembly experiments

wally • Science 49%

Wally: Visualization of aligned sequencing reads and contigs