Scientific Software
Updated 10 months ago

mlr3 — Peer-reviewed • Rank 21.2 • Science 95%

mlr3: A modern object-oriented machine learning framework in R - Published in JOSS (2019)

Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

TAXPASTA — Peer-reviewed • Rank 9.5 • Science 98%

TAXPASTA: TAXonomic Profile Aggregation and STAndardisation - Published in JOSS (2023)

Scientific Software
Updated 10 months ago

seesus — Peer-reviewed • Rank 6.9 • Science 100%

seesus: a social, environmental, and economic sustainability classifier for Python - Published in JOSS (2024)

Scientific Software
Updated 10 months ago

mcboost — Peer-reviewed • Rank 11.5 • Science 95%

mcboost: Multi-Calibration Boosting for R - Published in JOSS (2021)

Scientific Software
Updated 10 months ago

pactus — Peer-reviewed • Rank 8.1 • Science 98%

pactus: A Python framework for trajectory classification - Published in JOSS (2023)

Scientific Software
Updated 10 months ago

BetaML — Peer-reviewed • Rank 10.5 • Science 95%

BetaML: The Beta Machine Learning Toolkit, a self-contained repository of Machine Learning algorithms in Julia - Published in JOSS (2021)

Scientific Software
Updated 10 months ago

Scikit-Longitudinal — Peer-reviewed • Rank 10.7 • Science 93%

Scikit-Longitudinal: A Machine Learning Library for Longitudinal Classification in Python - Published in JOSS (2025)

Scientific Software
Updated 10 months ago

Annotate-Lab — Peer-reviewed • Rank 8.2 • Science 93%

Annotate-Lab: Simplifying Image Annotation - Published in JOSS (2024)

Scientific Software
Updated 10 months ago

Imbalance — Peer-reviewed • Rank 7.2 • Science 93%

Imbalance: A comprehensive multi-interface Julia toolbox to address class imbalance - Published in JOSS (2024)

Earth and Environmental Sciences (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

coder — Peer-reviewed • Rank 6.2 • Science 93%

coder: An R package for code-based item classification and categorization - Published in JOSS (2020)

Medicine (45%) Materials Science (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

treemaker — Peer-reviewed • Rank 6.1 • Science 93%

treemaker: A Python tool for constructing a Newick formatted tree from a set of classifications. - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Updated 10 months ago

pypots • Rank 21.6 • Science 77%

A Python toolkit/library for reality-centric machine/deep learning and data mining on partially-observed time series, including SOTA neural network models for scientific analysis tasks of imputation/classification/clustering/forecasting/anomaly detection/cleaning on incomplete industrial (irregularly-sampled) multivariate TS with NaN missing values

Scientific Software
Updated 10 months ago

RENT — Peer-reviewed • Rank 4.3 • Science 93%

RENT: A Python Package for Repeated Elastic Net Feature Selection - Published in JOSS (2021)

Scientific Software
Updated 10 months ago

LightTwinSVM — Peer-reviewed • Rank 2.5 • Science 93%

LightTwinSVM: A Simple and Fast Implementation of Standard Twin Support Vector Machine Classifier - Published in JOSS (2019)

Updated 10 months ago

mlni • Rank 9.0 • Science 77%

Machine Learning in NeuroImaging (MLNI) is a python package that performs various tasks using neuroimaging data.

Updated 10 months ago

ammico • Rank 10.1 • Science 75%

AI-based Media and Misinformation Content Analysis Tool: Analyze text and images

Updated 10 months ago

sdtf • Rank 4.0 • Science 77%

Exploring streaming options for decision trees and random forests. Based on scikit-learn fork.

Updated 10 months ago

stars-carla-experiments • Rank 2.3 • Science 77%

This repository analyzes driving data recorded with the Carla Simulator using the STARS framework.

Updated 10 months ago

mapie • Rank 22.7 • Science 54%

A scikit-learn-compatible library for estimating prediction intervals and controlling risks, based on conformal predictions.

Updated 10 months ago

rastervision • Rank 21.4 • Science 54%

An open source library and framework for deep learning on satellite and aerial imagery.

Updated 10 months ago

labelme • Rank 17.9 • Science 54%

Image Polygonal Annotation with Python (polygon, rectangle, circle, line, point and image-level flag annotation).

Updated 10 months ago

torchtime • Rank 3.6 • Science 67%

Benchmark time series data sets for PyTorch

Updated 10 months ago

immuneml • Rank 13.4 • Science 57%

immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.

Updated 10 months ago

triton • Rank 7.1 • Science 62%

:whale: Scripps Whale Acoustics Lab :earth_americas: Scripps Acoustic Ecology Lab - Triton with remoras in development

Updated 10 months ago

https://github.com/timeseriesai/tsai • Rank 21.4 • Science 46%

Time series Timeseries Deep Learning Machine Learning Python Pytorch fastai | State-of-the-art Deep Learning library for Time Series and Sequences in Pytorch / fastai

Updated 10 months ago

pyani • Rank 8.1 • Science 59%

Application and Python module for average nucleotide identity analyses of microbes.

Updated 10 months ago

pytextclassifier • Rank 12.2 • Science 54%

pytextclassifier is a toolkit for text classification. 文本分类,LR,Xgboost,TextCNN,FastText,TextRNN,BERT等分类模型实现,开箱即用。

Updated 10 months ago

llm-lct-sequencing • Rank 2.2 • Science 62%

AI Semantic Insights: LLM Toolkit for Analysing Educational Practices and Knowledge Building.

Updated 10 months ago

classeval • Rank 9.2 • Science 54%

Evaluation of supervised predictions for two-class and multi-class classifiers

Updated 10 months ago

rpart • Rank 25.4 • Science 36%

Recursive Partitioning and Regression Trees

Updated 10 months ago

https://github.com/cair/pytsetlinmachine • Rank 10.6 • Science 49%

Implements the Tsetlin Machine, Convolutional Tsetlin Machine, Regression Tsetlin Machine, Weighted Tsetlin Machine, and Embedding Tsetlin Machine, with support for continuous features, multigranularity, clause indexing, and literal budget

Updated 10 months ago

tsfel • Rank 19.2 • Science 39%

An intuitive library to extract features from time series.

Updated 10 months ago

WaveBreaking • Rank 7.8 • Science 49%

Detect, classify, and track Rossby Wave Breaking (RWB) in weather and climate data.

Updated 10 months ago

taxtriage • Rank 5.8 • Science 49%

TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomic NGS data. This flexible tool was developed with various use-cases of mNGS in mind.

Scientific Software
Updated 10 months ago

MLJ — Peer-reviewed • Rank 18.5 • Science 36%

MLJ: A Julia package for composable machine learning - Published in JOSS (2020)

Updated 10 months ago

llama-classification • Rank 4.7 • Science 44%

Text classification with Foundation Language Model LLaMA

Updated 10 months ago

thundersvm • Rank 17.5 • Science 23%

ThunderSVM: A Fast SVM Library on GPUs and CPUs

Updated 10 months ago

bark • Rank 6.7 • Science 33%

bark R package for Bayesian nonparametric kernel regression

Updated 10 months ago

rRDP • Rank 13.2 • Science 23%

Seamlessly interfaces RDP classifier.

Updated 10 months ago

projection-pursuit • Rank 3.6 • Science 31%

An implementation of multivariate projection pursuit regression and univariate classification

Updated 10 months ago

stylest • Rank 10.0 • Science 23%

R package for estimating speaker style distinctiveness in texts. Install it from CRAN!

Updated 10 months ago

catsim • Rank 9.6 • Science 23%

A structural similarity index for binary or categorical images that works in 2D or 3D.

Updated 10 months ago

lcc • Rank 9.2 • Science 23%

Package for machine learning of astronomical objects such as light curves

Updated 10 months ago

3d-forest • Rank 5.4 • Science 26%

Visualization, processing and analysis of Lidar point clouds, mainly focused on forest environment. New version of 3D Forest. Process files with terabytes of data. Edit new point attributes. Simple addition of new features by plugins.

Updated 10 months ago

https://github.com/gperdrizet/ensembleset • Rank 5.0 • Science 26%

Ensemble dataset generator for tabular data prediction and modeling projects.

Updated 10 months ago

https://github.com/cair/pytsetlinmachineparallel • Rank 7.5 • Science 23%

Multi-threaded implementation of the Tsetlin Machine, Convolutional Tsetlin Machine, Regression Tsetlin Machine, and Weighted Tsetlin Machine, with support for continuous features and multigranularity.

Updated 10 months ago

ugtm • Rank 11.0 • Science 13%

ugtm: a Python package for Generative Topographic Mapping

Updated 10 months ago

arulesCBA • Rank 13.2 • Science 10%

Classification Based on Association Rules in R

Updated 10 months ago

rfUtilities • Rank 10.0 • Science 13%

R package for random forests model selection, inference, evaluation and validation

Updated 10 months ago

built • Rank 6.6 • Science 13%

BuilT - Build a Trainer of deep neural networks

Updated 10 months ago

pycoal • Rank 9.4 • Science 10%

Python toolkit for characterizing Coal and Open-pit surface mining impacts on American Lands

Updated 10 months ago

oasis • Rank 8.4 • Science 10%

A Python package for efficient evaluation based on OASIS (Optimal Asymptotic Sequential Importance Sampling).

Updated 10 months ago

marine-debris.github.io • Rank 5.0 • Science 13%

Quick Start Guide for MARIDA (Marine Debris Archive)

Updated 10 months ago

https://github.com/agamiko/bird-recognition-review • Science 36%

A list of useful resources in the bird sound (song and calls) recognition, such as datasets, papers, links to open source projects and competitions

Updated 10 months ago

toxic-video-games-gnn • Science 36%

Toxic video game classification with graph neural networks

Updated 10 months ago

fridgie_paper • Science 67%

This is a paper and its supplementary material, bundled together.

Updated 10 months ago

auto-sklong • Science 49%

☂️ Auto-Scikit-Longitudinal (Auto-Sklong) is an automated machine learning (AutoML) library designed to analyse longitudinal data (Classification tasks focussed as of today) using various search methods. Namely, Bayesian Optimisation via SMAC3, Asynchronous Successive Halving, Evolutionary Algorithms, and Random Search via GAMA