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Open Source Science

Scientific Software
Updated 6 months ago

The UCSCXenaTools R package — Peer-reviewed • Rank 13.8 • Science 95%

The UCSCXenaTools R package: a toolkit for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq - Published in JOSS (2019)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

genomepy — Peer-reviewed • Rank 17.3 • Science 59%

genomepy: download genomes the easy way - Published in JOSS (2017)

Engineering (40%)
Scientific Software · Peer-reviewed
Updated 6 months ago

https://github.com/alexpreynolds/soda • Rank 5.6 • Science 13%

Python-based UCSC genome browser snapshot-taker and gallery-maker