Updated 10 months ago
https://github.com/bigbio/py-pgatk
Python tools for proteogenomics analysis toolkit
Updated 10 months ago
biomaRt
R package providing query functionality to BioMart instances like Ensembl
Updated 10 months ago
https://github.com/bridgedb/create-bridgedb-genedb
Example of script to query BioMart, parse and create a BridgeDb database
Updated 10 months ago
fair_genome_indexer
Download and index Ensembl sequences and annotations, remove non-canonical chromosimes, remove low TSL, index with multiple tools