Updated 6 months ago
biocommons.seqrepo
non-redundant, compressed, journalled, file-based storage for biological sequences
Updated 6 months ago
hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
Updated 5 months ago
https://github.com/biocommons/bioutils
provides common tools and lookup tables used primarily by the hgvs and uta packages
Updated 5 months ago
https://github.com/biojulia/geneticvariation.jl
Datastructures and algorithms for working with genetic variation
Updated 5 months ago
https://github.com/ajayarunachalam/msda
Library for multi-dimensional, multi-sensor, uni/multivariate time series data analysis, unsupervised feature selection, unsupervised deep anomaly detection, and prototype of explainable AI for anomaly detector
anamoly-detection-using-graphs
anomaly-detection
correlation
data-analysis
deep-learning
deep-neural-networks
explainable-artificial-intelligence
feature-engineering
feature-selection
multidimensional-data
multisensor
python
pytorch
sensor
sensor-data
signal-processing
tabular-data
time-series
variation
visualization
Updated 5 months ago
https://github.com/biocommons/anyvar
[in development] Proof-of-Concept variation translation, validation, and registration service
Updated 5 months ago
https://github.com/biocommons/seqrepo-rest-service
OpenAPI-based REST interface to biological sequences and sequence metadata