GitHub
python-ternary
:small_red_triangle: Ternary plotting library for python with matplotlib
https://github.com/astro-informatics/s2let
Fast wavelet transforms on the sphere.
dantro
dantro is a Python package to handle, transform, and visualize hierarchically structured data. Docs @ https://dantro.readthedocs.io — NOTE: This repository is a READ-ONLY-MIRROR of the actual development repository; for open issues and MRs, see there:
papaja
papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.
epialleleR
Fast, epiallele-aware methylation caller and reporter — an R/Bioconductor package
alfred-bibtex-citation-picker
Picker for markdown-based citations and lightweight reference manager for BibTeX libraries.
nps-activespace
A Python implementation of observer-based audibility modelling methods
tts-mos-test-mturk
Command-line interface (CLI) and Python library to evaluate text-to-speech (TTS) mean opinion score (MOS) studies done on Amazon Mechanical Turk (MTurk). The calculation of the confidence intervals is done in the same manner as described in (Ribeiro et al., 2011).
covid-19-todesfaelle_in_deutschland
Im Datensatz 'COVID-19-Todesfälle in Deutschland' werden die Todesfälle in Bezug auf COVID-19 in Deutschland bereitgestellt. Darüber hinaus wird neben der Anzahl der übermittelten Todesfälle der Fall-Verstorbenen-Anteil berechnet. Angaben zum Tod zählen zu den melde- und übermittlungspflichtigen Inhalten. Bei der Ermittlung von Todesfällen und d...
@stdlib/random-iter-mt19937
Create an iterator for a 32-bit Mersenne Twister pseudorandom number generator.
AbstractAlgebra
Generic abstract algebra functionality in pure Julia (no C dependencies)
KolmogorovArnold
Julia implementation of the Kolmogorov-Arnold network with custom gradients for fast training.
oaebu-workflows
Telescopes, Workflows and Data Services for the 'Book Analytics Dashboard Project (2022-2025)', building upon the project 'Developing a Pilot Data Trust for Open Access eBook Usage (2020-2022)'
ia-webscraping
An AWS workflow for collecting webpages from the Internet Archive
ile-de-france
An open synthetic population of Île-de-France for agent-based transport simulation
mqt.qao
MQT Quantum Auto Optimizer - A MQT Tool for Solving Optimization Problems with Quantum Computers
py-dataset
Python package of dataset (https://github.com/caltechlibrary/dataset) for working with JSON objects as collections on disc
pymunk
Pymunk is a easy-to-use pythonic 2d physics library that can be used whenever you need 2d rigid body physics from Python
synthetic-zariski
Latex documentation of our understanding of the synthetic /internal theory of the Zariski-Topos
pymccrgb
pymccrgb: Color- and curvature-based classification of multispectral point clouds in Python - Published in JOSS (2019)
dryad
Dryad is a Nextflow pipeline for examining prokaryote relatedness. Dryad can perform a reference free analysis and/or SNP analysis.
pyiron_base
Core components of the pyiron integrated development environment (IDE) for computational materials science
awesome-transit
Community list of transit APIs, apps, datasets, research, and software :bus::star2::train::star2::steam_locomotive:
spezi
Open-source framework for rapid development of modern, interoperable digital health applications.
rsofun
Implements the Simulating Optimal FUNctioning framework for site-scale simulations of ecosystem processes, including model calibration. It contains Fortran 90 modules for the P-model, SPLASH, and BiomeE models.
OceanSpy
OceanSpy: A Python package to facilitate ocean model data analysis and visualization - Published in JOSS (2019)
GasChromatographySimulator.jl
GasChromatographySimulator.jl - Published in JOSS (2022)
spilterlize_integrate
A Snakemake workflow and MrBiomics module to split, filter, normalize, integrate and select highly variable features of count matrices resulting from next-generation sequencing (NGS) experiments (e.g., RNA-seq, ATAC-seq, ChIP-seq, Methyl-seq, miRNA-seq,...) including confounding factor analysis and diagnostic visualizations.
reemission
Re-Emission is a collection of methods for calculating GHG emisisons from reservoirs
momentuHMM
Maximum likelihood analysis Of animal MovemENT behavior Using multivariate Hidden Markov Models
pyhpc-benchmarks
A suite of benchmarks for CPU and GPU performance of the most popular high-performance libraries for Python :rocket:
detectree2
Python package for automatic tree crown delineation based on the Detectron2 implementation of Mask R-CNN
alignment-handbook
Robust recipes to align language models with human and AI preferences
ezflow
A modular PyTorch library for optical flow estimation using neural networks
hypermat
Hyperelastic formulations using an algorithmic differentiation with hyper-dual numbers in Python.
https://github.com/cbg-ethz/cowwid
Procedure used for the surveillance of SARS-CoV-2, RSV and Influenza genomic variants in wastewater.
ckanext-query-dois
A CKAN extension that creates DOIs for queries on resources.
flashlight-text
Text utilities, including beam search decoding, tokenizing, and more, built for use in Flashlight.
ckanext-attribution
A CKAN extension that adds support for complex attribution.
awesome-open-geoscience
Curated from repositories that make our lives as geoscientists, hackers and data wranglers easier or just more awesome
coolpuppy
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
ControlSystems
A Control Systems Toolbox for Julia
https://github.com/althonos/pyopal
Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.
udocker
A basic user tool to execute simple docker containers in batch or interactive systems without root privileges.