qpsolvers • Rank 21.2 • Science 54%

Quadratic programming solvers in Python with a unified API

hamr • Rank 3.2 • Science 72%

Heterogeneous Accelerator Memory Resource

Weave.jl — Peer-reviewed • Rank 16.2 • Science 59%

Weave.jl: Scientific Reports Using Julia - Published in JOSS (2017)

bigsnpr • Rank 16.2 • Science 59%

R package for the analysis of massive SNP arrays.

https://github.com/bluebrain/morphology-workflows • Rank 8.1 • Science 67%

Workflows used for morphology processing.

pysam • Rank 29.1 • Science 46%

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.

aswan • Rank 8.1 • Science 67%

Concurrent data collection, compression and storage

haptools • Rank 10.1 • Science 65%

Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

PowerModels.jl • Rank 16.1 • Science 59%

A Julia/JuMP Package for Power Network Optimization

sps • Rank 8.1 • Science 67%

An R package for sequential Poisson sampling

tinygp • Rank 16.1 • Science 59%

The tiniest of Gaussian Process libraries

https://github.com/biocore/improved-octo-waddle • Rank 16.1 • Science 59%

Balanced parentheses succinct data structure in Python

celerite • Rank 16.1 • Science 59%

Scalable 1D Gaussian Processes in C++, Python, and Julia

nltools • Rank 16.1 • Science 59%

Python toolbox for analyzing imaging data

cmcrameri • Rank 18.1 • Science 57%

Making Fabio Crameri's perceptually uniform colourmaps for geosciences available on PyPI and conda-forge

snappysonic • Rank 8.1 • Science 67%

SnappySonic is an Ultrasound Simulator for use in research and public engagement.

skosprovider-heritagedata • Rank 8.1 • Science 67%

A skosprovider for the services at heritagedata.org

pyrea • Rank 8.1 • Science 67%

Multi-view clustering with flexible ensemble structures.

onnx2torch • Rank 21.1 • Science 54%

Convert ONNX models to PyTorch.

typestate • Rank 18.1 • Science 57%

Proc-macro typestate DSL for Rust

pyscancf • Rank 8.1 • Science 67%

Converts individual sweeps from IMD radars to Cf-Radial1 radar data.

avi-mmdet • Rank 29.1 • Science 46%

OpenMMLab Detection Toolbox and Benchmark

rdocdump • Rank 8.1 • Science 67%

rdocdump: Dump ‘R’ Package Source, Documentation, and Vignettes into One File

netmeta • Rank 16.0 • Science 59%

Official Git repository of R package netmeta

Bio3DView • Rank 8.0 • Science 67%

A Julia package to view macromolecular structures in the REPL, in a Jupyter notebook/JupyterLab or in Pluto

tutorials • Rank 8.0 • Science 67%

The PO.DAAC Cookbook: A place to find data recipes and tutorials for PO.DAAC datasets, tools & services

sits • Rank 16.0 • Science 59%

Satellite image time series in R

morph-kgc • Rank 8.0 • Science 67%

Powerful RDF Knowledge Graph Generation with RML Mappings

tree-of-thought-prompting • Rank 8.0 • Science 67%

Using Tree-of-Thought Prompting to boost ChatGPT's reasoning

pycytominer • Rank 16.0 • Science 59%

Python package for processing image-based profiling data

aiogram • Rank 31.0 • Science 44%

aiogram is a modern and fully asynchronous framework for Telegram Bot API written in Python using asyncio

calibr • Rank 0.0 • Science 75%

Parallelized Bayesian calibration of simulations using Gaussian process emulation

taxis-vis-frontend • Rank 0.0 • Science 75%

🌐 Interactive Viz. Platform for taxi trip data from any city using React, MapBox, Plotly.js & the beast DuckDB-WASM

standardized-competency-catalog • Rank 0.0 • Science 75%

The standardized competency catalog used at TUM

census • Rank 21.0 • Science 54%

A Python wrapper for the US Census API.

fastai • Rank 29.0 • Science 46%

The fastai deep learning library

awesome-dem • Rank 8.0 • Science 67%

Overview of Digital Elevation Model (DEM) datasets

cresset • Rank 8.0 • Science 67%

Template repository to build PyTorch projects from source on any version of PyTorch/CUDA/cuDNN.

cytomapper • Rank 16.0 • Science 59%

R package for visualization of highly multiplexed imaging data

ncvreg • Rank 15.9 • Science 59%

Regularization paths for SCAD- and MCP-penalized regression models

@ewatercycle/jupyterlab_thredds • Rank 7.9 • Science 67%

JupyterLab dataset browser for THREDDS catalog

CDDLib • Rank 10.9 • Science 64%

cdd wrapper module for Julia. cdd is a library for polyhedra manipulation such as double description and Fourier-Motzkin elimination

Clarabel • Rank 12.9 • Science 62%

Clarabel.jl: Interior-point solver for convex conic optimisation problems in Julia.

euro-calliope • Rank 7.9 • Science 67%

A workflow to build models of the European electricity system for Calliope.

@mintlify/openapi-parser • Rank 30.9 • Science 44%

Scalar is an open-source API platform:　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　🌐 Modern Rest API Client　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　📖 Beautiful API References　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　　✨ 1st-Class OpenAPI/Swagger Support

pygridmet • Rank 7.9 • Science 67%

Access daily climate data from GridMet over CONUS

azely • Rank 7.9 • Science 67%

:zap: Azimuth/elevation calculator for astronomical objects

pynamer • Rank 7.9 • Science 67%

A pseudo pip-search utility to ascertain if a package name is available in the PyPI repository and 'register' it

sotb-wrapper • Rank 7.9 • Science 67%

This repo shows how to use SEISCOPE optimization toolbox Fortran code from Python

pfhub • Rank 7.8 • Science 67%

The CHiMaD Phase Field Community Website

duqtools • Rank 10.8 • Science 64%

Dynamic uncertainty quantification for Tokamak reactor simulations modelling

sctenifoldpy • Rank 7.8 • Science 67%

A python package implements scTenifoldnet and scTenifoldknk

svgtiler • Rank 10.8 • Science 64%

Tool for drawing diagrams on a grid, combining grids of SVGs into a big SVG figure

diagrams • Rank 7.8 • Science 67%

Diagrams of concepts in physics/chemistry/ML

finmeter • Rank 7.8 • Science 67%

Tools for assessing Finnish poetry: rhymes, meter, hyphenation of Finnish and so on.

hallucination-leaderboard • Rank 10.8 • Science 64%

Leaderboard Comparing LLM Performance at Producing Hallucinations when Summarizing Short Documents

fairret • Rank 7.8 • Science 67%

A fairness library in PyTorch.

mousetrap • Rank 15.8 • Science 59%

Process and Analyze Mouse-Tracking Data

cloudmetrics • Rank 7.8 • Science 67%

Toolkit for computing 15+ metrics characterising 2D cloud patterns

https://github.com/pypr/pysph • Rank 15.8 • Science 59%

A framework for Smoothed Particle Hydrodynamics in Python

antspynet • Rank 15.8 • Science 59%

Pre-trained models and utilities for deep learning on medical images in Python

RcppArmadillo • Rank 25.8 • Science 49%

Rcpp integration for the Armadillo templated linear algebra library

https://github.com/zblz/naima • Rank 15.8 • Science 59%

Derivation of non-thermal particle distributions through MCMC spectral fitting

feelpp-benchmarking • Rank 7.8 • Science 67%

Feel++ Benchmarking

pdal • Rank 15.8 • Science 59%

PDAL is Point Data Abstraction Library. GDAL for point cloud data.

powerplantmatching • Rank 15.8 • Science 59%

Set of tools to combine multiple power plant databases

gemmkernels.jl • Rank 7.8 • Science 67%

Flexible and performant GEMM kernels in Julia

psichomics • Rank 15.8 • Science 59%

Interactive R package to quantify, analyse and visualise alternative splicing

sc2reader • Rank 15.7 • Science 59%

Extracts gameplay information from Starcraft II replay files

urban_road_filter • Rank 7.7 • Science 67%

Real-time LIDAR-based Urban Road and Sidewalk detection for Autonomous Vehicles 🚗

cosmosR • Rank 15.7 • Science 59%

COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

conette • Rank 7.7 • Science 67%

CoNeTTE: An efficient Audio Captioning system leveraging multiple datasets with Task Embedding

SpatialPosition • Rank 12.7 • Science 62%

R package for computing spatial position models

oqpy • Rank 17.7 • Science 57%

OpenQASM 3 + OpenPulse in Python

pyfmmlib • Rank 10.7 • Science 64%

Python wrappers around fmmlib{2,3}d by Greengard/Gimbutas

fio • Rank 20.7 • Science 54%

Flexible I/O Tester

AngleBetweenVectors • Rank 7.7 • Science 67%

An accurate and stable calculation of the angle separating two vectors.

pybuildingenergy • Rank 7.7 • Science 67%

python package to simulate the building performance of a building using the ISO 52000

pointblank • Rank 20.7 • Science 54%

Data quality assessment and metadata reporting for data frames and database tables

openmht • Rank 7.7 • Science 67%

Python module for multiple hypothesis tracking.

https://github.com/aresio/fst-pso • Rank 15.7 • Science 59%

A settings-free global optimization method based on PSO and fuzzy logic

succulent • Rank 7.7 • Science 67%

Collect POST requests

tree-sitter-graph • Rank 20.6 • Science 54%

Construct graphs from parsed source code

fair-cli • Rank 10.6 • Science 64%

Command line interface for the FAIR Data Pipeline

SolverTools • Rank 10.6 • Science 64%

Tools for developing nonlinear optimization solvers.

geovista-slam • Rank 7.6 • Science 67%

Generating Structured Local Area Model (SLAM) grids from unstructured meshes

simplicial • Rank 7.6 • Science 67%

Simplicial topology in Python

nomad-parser-plugins-electronic • Rank 15.6 • Science 59%

StructuralEquationModels • Rank 7.6 • Science 67%

A fast and flexible Structural Equation Modelling Framework

gnssrefl • Rank 15.6 • Science 59%

GNSS Interferometric Reflectometry Software (GNSS-IR) in python

telestion • Rank 7.6 • Science 67%

Build your Ground Station Software with Telestion.

mahotas • Rank 20.6 • Science 54%

Computer Vision in Python

@cleerly/cornerstone-wado-image-loader • Rank 20.6 • Science 54%

[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/

https://github.com/astropy/halotools • Rank 15.6 • Science 59%

Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models

bench • Rank 7.6 • Science 67%

MQT Bench - A MQT Tool for Benchmarking Quantum Software Tools

vulntrain • Rank 7.6 • Science 67%

A tool to generate datasets and models based on vulnerabilities descriptions from @Vulnerability-Lookup.

idaes-pse • Rank 20.6 • Science 54%

The IDAES Process Systems Engineering Framework

cateyes • Rank 7.6 • Science 67%

Categorization for Eye Tracking - simplified

data-safe-haven • Rank 12.6 • Science 62%

poppunk • Rank 7.5 • Science 67%

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)