baysc: An R package for Bayesian survey clustering • Science 87%

baysc: An R package for Bayesian survey clustering - Published in JOSS (2026)

biodiscvr: Biomarker Discovery Using Composite Value Ratios • Science 87%

biodiscvr: Biomarker Discovery Using Composite Value Ratios - Published in JOSS (2026)

Napari-3D-Counter: A manual cell counter for napari • Science 87%

Napari-3D-Counter: A manual cell counter for napari - Published in JOSS (2026)

PySGN: A Python package for constructing synthetic geospatial networks • Science 87%

PySGN: A Python package for constructing synthetic geospatial networks - Published in JOSS (2026)

evoxels: A differentiable physics framework for voxel-based microstructure simulations • Science 87%

evoxels: A differentiable physics framework for voxel-based microstructure simulations - Published in JOSS (2026)

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions • Science 87%

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions - Published in JOSS (2026)

Tissue Data Explorer: a website template for presenting tissue sample research findings • Science 95%

Tissue Data Explorer: a website template for presenting tissue sample research findings - Published in JOSS (2026)

targene-pipeline • Science 44%

Nextflow pipeline for Targeted-Learning of genetic effects

SkyRank: a unified toolkit for Skyline ranking, benchmarking, and visualization • Science 87%

SkyRank: a unified toolkit for Skyline ranking, benchmarking, and visualization - Published in JOSS (2026)

etl-forge • Science 54%

ParaDigMa: a Python toolbox for extracting Parkinson's disease digital biomarkers from daily life wrist sensor data • Science 92%

ParaDigMa: a Python toolbox for extracting Parkinson's disease digital biomarkers from daily life wrist sensor data - Published in JOSS (2026)

rmcmc • Science 57%

Robust Markov chain Monte Carlo methods in R

datatidy24sta5069z • Science 44%

Tidy data for analysis for STA5069Z course

xr_fresh: Automated Time Series Feature Extraction for Remote Sensing & Gridded Data • Science 93%

xr_fresh: Automated Time Series Feature Extraction for Remote Sensing & Gridded Data - Published in JOSS (2025)

Chemical Recommender System: Replacement Suggestions for Small Molecules • Science 87%

Chemical Recommender System: Replacement Suggestions for Small Molecules - Published in JOSS (2026)

SpectralUnmixing • Science 44%

Spectral unmixing, oriented towards imaging spectroscopy data. Lots of flavors included.

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control • Science 87%

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control - Published in JOSS (2025)

emgflow • Science 44%

Github repository for the EMGFlow Python package.

MatrixBandwidth • Science 44%

Fast algorithms for matrix bandwidth minimization and matrix bandwidth recognition in Julia.

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination • Science 87%

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination - Published in JOSS (2025)

molify: Molecular Structure Interface • Science 87%

molify: Molecular Structure Interface - Published in JOSS (2025)

dispersiveshallowwater.jl • Science 67%

A Julia library of structure-preserving numerical methods for dispersive wave equations

grepq — Peer-reviewed • Science 98%

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions - Published in JOSS (2025)

gibbonNetR — Peer-reviewed • Science 93%

gibbonNetR: an R Package for the Use of Convolutional Neural Networks for Automated Detection of Acoustic Data - Published in JOSS (2025)

gtexr — Peer-reviewed • Science 98%

gtexr: A convenient R interface to the Genotype-Tissue Expression (GTEx) Portal API - Published in JOSS (2025)

gtk-fortran — Peer-reviewed • Science 54%

gtk-fortran: a GTK+ binding to build Graphical User Interfaces in Fortran - Published in JOSS (2019)

portalcasting — Peer-reviewed • Science 59%

portalcasting: Supporting automated forecasting of rodent populations - Published in JOSS (2022)

Unishox — Peer-reviewed • Science 98%

Unishox: A hybrid encoder for Short Unicode Strings - Published in JOSS (2022)

dataaimsr — Peer-reviewed • Science 93%

dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform - Published in JOSS (2021)

chirps — Peer-reviewed • Science 93%

chirps: API Client for the CHIRPS Precipitation Data in R - Published in JOSS (2020)

iheatmapr — Peer-reviewed • Science 95%

iheatmapr: Interactive complex heatmaps in R - Published in JOSS (2017)

rnassqs — Peer-reviewed • Science 95%

rnassqs: An R package to access agricultural data via the USDA National Agricultural Statistics Service (USDA-NASS) 'Quick Stats' API - Published in JOSS (2019)

rtweet — Peer-reviewed • Science 46%

rtweet: Collecting and analyzing Twitter data - Published in JOSS (2019)

containerit — Peer-reviewed • Science 95%

containerit: Generating Dockerfiles for reproducible research with R - Published in JOSS (2019)

mitolina — Peer-reviewed • Science 93%

mitolina: MITOchondrial LINeage Analysis - Published in JOSS (2019)

nasapower — Peer-reviewed • Science 95%

nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R - Published in JOSS (2018)

weathercan — Peer-reviewed • Science 95%

weathercan: Download and format weather data from Environment and Climate Change Canada - Published in JOSS (2018)

arrgh — Peer-reviewed • Science 95%

arrgh: a Go interface to the OpenCPU R server system - Published in JOSS (2018)

High-Dimensional Integrator — Peer-reviewed • Science 95%

High-Dimensional Integrator - Published in JOSS (2017)

bomrang — Peer-reviewed • Science 59%

bomrang: Fetch Australian Government Bureau of Meteorology Data in R - Published in JOSS (2017)

eva • Science 49%

Eological evaluation assessment (EVA) tool produced in Marbefes project

pdindicator • Science 67%

Repository for the phylogenetic diversity indicator workflow as part of the B3 project.

advanced-data-analysis-on-research-publications-proyect • Science 67%

Repositorio que se usara para crear cambios en el proyecto de Inteligencia Artificial, para agrupar publicaciones cientificas por un tema en comun, conectarlos con un grafo de conocimientos e implementacion de queries

uklakes • Science 49%

Repo for uklakes R package, which allows access to data on UK CEH Lakes portal

edam-browser • Science 67%

Stand-alone, lightweight, and fast JavaScript browser for EDAM and other ontologies

blogit • Science 44%

A tool for curating Common Mark and Markdown front matter and publishing to a staging blog directory.

grainviewer • Science 49%

The official implementation of the research paper "Real-time multiscale rendering of dense dynamic stackings"

aireadi.org • Science 67%

Website of the AI-READI project

network.r2d3 • Science 44%

kartographi • Science 44%

KartoGraphI: Knowledge graph Cartography and Index

dataelementmaps • Science 67%

Common Data Element Mappings

electronic-laboratory-notebook • Science 57%

somef-core • Science 57%

A repository for a common research software metadata extractor

elm_spruce • Science 57%

Development for SPRUCE based on ELM-Peatlands

sparql-micro-service • Science 57%

SPARQL micro-services: A lightweight approach to query Web APIs with SPARQL

yes-yes-yes • Science 44%

simplified • Science 52%

An intermediate metadata model as Go struct for migrating content from EPrints 3.3. to Invenio-RDM 11

pairtree • Science 52%

A simple encoder/decoder for converting object identifiers into a Pair Tree Path (path)

projr • Science 52%

Streamline R projects

electricity-price-forecast-tft • Science 67%

Forecast of the SPOT Price in the Spanish Electricity Market with Neural Networks

e3sm • Science 57%

ssnolib • Science 44%

Python library for working with the SSNO ontology.

os_group_project • Science 67%

schrodingerapi • Science 67%

pybamm-param • Science 67%

Parameter optimisation for PyBaMM.

idealii • Science 54%

relative-difference-sets • Science 57%

Database of existence results for cyclic (m,n,k,lambda)-relative difference sets with k<=256

frs • Science 49%

Software for simulations and data analysis of FRS/Super-FRS/R3B experiments at GSI/FAIR

eph • Science 49%

Herramientas para procesamiento de la base usuaria de la EPH

harvester-curator • Science 44%

Collect metadata from a data and/or software directory and create the corresponding dataset in the data repository, DaRUS

codefair-test-repo • Science 44%

A repo for testing codefair

leslie • Science 49%

pgrdup • Science 67%

Discover Probable Duplicates in Plant Genetic Resources Collections

biocor • Science 44%

qualitymetadataspatiallandmarkdataset • Science 49%

Metadata describing and assessing the quality of spatial landmark datasets in mountain area

babette • Science 49%

babette is an R package to work with BEAST2

treeio • Science 49%

:seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

viper • Science 67%

Viral Inhibition via Peptide Engineering and Receptor-Mimicry

e3sm_rrm • Science 57%

linear-time-runs • Science 49%

tccon-caltechdata • Science 52%

Scripts for uploading TCCON data to CaltechDATA

artemis • Science 44%

Artemis is my project to create portable Oberon-07 modules that can be used in POSIX and Oberon System.

cover • Science 44%

Clustering with Overlaps in R

panako_adjusted • Science 57%

censo2017 • Science 49%

Una Base de Datos de Alto Rendimiento del Censo 2017 de Chile.

fairmq • Science 49%

C++ Message Queuing Library and Framework

beaverdam • Science 65%

Build, Explore, and Visualize Experimental Data and Metadata

gammapyxray-fork • Science 67%

treedistdata • Science 49%

Data and vignettes to accompany TreeDist packages

denjji • Science 44%

ppl-cc-ti1-2024-1-g-conectando-ong-s-2 • Science 44%

ti-1-ppl-cc-m-20241-2-conectando-ong-s-2 created by GitHub Classroom

egpdidf • Science 67%

binary-phase-estimation • Science 54%

An interferometric setup for estimating the binary expansion of an unknown phase.

cena_imaging • Science 44%

This code is for analysing Chandra subpixel images of Centaurus A, to look for variation and proper motions.

stata-ternary • Science 44%

A Stata package for trivariate plots

https://github.com/friesischscott/sliceddistributions.jl • Science 49%

Estimation and sampling of sliced distributions

imaei.github.io • Science 44%

ansible-unattended-upgrades • Science 44%

libreoffice-calc-table-templates • Science 67%

The Universal Spreadsheet Compilation in LibreOffice Calc includes various types of spreadsheets such as workplace, operations, student, business, accounting, procurement, household, public affairs, personnel, and miscellaneous.

sibyl • Science 44%

Latest Notice: GUI deployment is facing some issues as of 23.01.2024 --- local deployment is still successful from the authors. Should app deployment not be possible from your end,please contact Ritabrata or Rishi for demonstration. To look into our commits details ,please check the wiki of the repository.