GitHub
jlmerclusterperm
Fast cluster-based permutation test for densely-sampled, multi-level time series data (ex: eyetracking, EEG)
a-model-of-individual-bmi-trajectories
Supplementary Information for the article "A Model of Individual BMI Trajectories" by Laurens Bogaardt, Anoukh van Giessen, H. Susan J. Picavet, Hendriek C. Boshuizen published on 26 February 2024 in Mathematical Medicine and Biology.
https://github.com/llrs/pathways-study
Analyze and compare different pathway resources
trackdlo
[RA-L 2023, ICRA 2024, ICRA RMDO 2024] This repository contains the code used in our paper, "TrackDLO: Tracking Deformable Linear Objects Under Occlusion with Motion Coherence." This algorithm is useful for tracking the motion of DLOs, including wire and rope, under several categories of occlusion without physics simulation.
characterising-phytochrome-photostates-using-uv-vis-absorption-spectra
This file contains the script that allows the user to determine the amounts of Pfr (15E) and Pr (15Z) in a phytochrome sample using the data obtained via UV/Vis absorption spectroscopy. Consult link below or ReadMe for more information
bgcflow_wrapper
A snakemake wrapper and utility tools command line interface for BGCFlow.
minimal_vae_on_selfies
A minimal implementation of a VAE on molecules, encoded as SELFIES
quantum-energy-teleportation
The complete quantum code for demonstrating quantum energy teleportation on IBM's real quantum computers.
https://github.com/fets-ai/gandlf
A generalizable application framework for segmentation, regression, and classification using PyTorch
rpylib
Multilevel Monte-Carlo simulation of Lévy-driven SDEs via a Continuous-Time Markov Chain approximation
openvlbi
OpenVLBI provides a library and an application suite for astronomical interferometry
disruptive-papers-fetal-surgery
Python code for disruptive papers in fetal surgery project
fmap
An R package for creating Fresnel Maps, a new thematic mapping technique in which spatial data is visualised to equal-area concentric circular zones (or annuli).
https://github.com/biometris/lmmsolver
See https://biometris.github.io/LMMsolver for a full description
signed-difference-sets
Repository of known signed difference sets and existence results
inflamer
INFLAMeR: a machine learning algorithm based on large-scale perturbation screening identified new lncRNAs regulating differentiation and survival of leukaemia cells
saliendet-open-detection
This is the official project for SalienDet: A Saliency-based Feature Enhancement Algorithm for Object Detection for Autonomous Driving
https://github.com/ffri/cve-2025-24204
PoC and technical details of CVE-2025-24204
https://github.com/llrs/mirna-ha
Efforts to relate miRNA from blood to clinical variables from alcoholic hepatitis
circulant-weighing-matrices
Dataset of circulant weighing matrices and existence results
datatidy23rodohonsmult
Tidy data for demonstration and assessment for UCT statistics honours multivariate course
readmine
Example README file demonstrating a suggested README file structure for software projects
h2-in-pipes
Equation of state for natural gas (several varieties) and mixtures with hydrogen. Also Moody plots for the calculation of the friction factor in rough pipes.
irdm_harvester
Automatically harvest publications for an InvenioRDM repository
calibrated-explanations
Repository for the explanation method Calibrated Explanations (CE)
disa-windows-server-2016
This repository is part of the paper Automated Implementation of Windows-related Security-Configuration Guides presented at the 35th IEEE/ACM International Conference on Automated Software Engineering.
pico_tree
A C++ header only library for fast nearest neighbor and range searches using a KdTree. It supports interfacing with Eigen, OpenCV, and custom data types and provides optional Python bindings.
https://github.com/llrs/10.1038
Tries to reproduce letter of Nature with doi:10.1038/nature14468
PhyloTraits
Julia package for the analysis of trait evolution along a phylogeny, including phylogenetic networks.
doc2vec-doc-relevance
An approach exploring and assessing literature-based doc-2-doc recommendations using a doc2vec and applying to the RELISH dataset.
scholarvista
ScholarVista analyses research papers and extracts/plots information about them. It uses Grobid to extract all the content of the research papers. Then all this data is plotted and displayed using Python.
inbomd_examples
Examples files for https://www.github.com/inbo/inbomd. See the website for the rendered versions.
proceed-ppe
Code needed to generate a PPE in the PROCEED framework using E3SMv3.
openscienceindividual
Artificial Intelligence And Open Science In Research Software Engineering
cw23-hermes-demo
A demo repository to show how to automate software publication on