GitHub
3dcap-md-gen
Scripts for exporting scanning metadata as described in the publication "Metadata Schema and Ontology for Archaeological Object Documentation including 3D Imaging (AOD-3DI)"
ensemblecontrolsimulation
Supplementary code for the manuscript: Convergence rates for ensemble-based solutions to optimal control of uncertain dynamical systems
https://github.com/dcelisgarza/portfoliooptimiser.jl
Portfolio optimisation library.
high-throughput-lmto
This package automates the TB-LMTO-ASA program for high-throughput calculations
https://github.com/dcelisgarza/riskfolio-lib
Portfolio Optimization and Quantitative Strategic Asset Allocation in Python
https://github.com/dcelisgarza/makie.jl
Interactive data visualizations and plotting in Julia
elixir-trp-fair-training-handbook
Train-the-trainer handbook for making training materials FAIR
multiplesequencealign
A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.
mapping-thonet
„Mapping Thonet“ is the new visual processing of the image research of the master thesis "Das öffentliche Bild des Thonet/The public image of Thonet". In a earlier stage selected photographic image contents of the research were territorially located in a historical map. The project was funded by the NEUSTART KULTUR in 2021
presentation-fowita23
Integration von ALS-Daten für ein verbessertes Waldschadensmonitoring
template-metadata-files
Collection of metadata files (gitignore, pyproject, editorconfig, license etc.) to be used for initializing workflow and project repositories
https://github.com/dimits-ts/deliberate-lab-utils
Local LLM server and automation scripts for Google's deliberate lab development
minimal-gross
SageMath implementation of the algorithms and results of the computations described in the paper "Gross lattices of supersingular elliptic curves."
docker-singularity-hats
Introduction to using Docker and Singularity containers in CMS(SW)
dev.dsf:dsf-bpe-pom
A distributed process engine based on the BPMN 2.0 and FHIR R4 standards
mde-presentation-egu2023
Presentation on the Model Data Explorer at EGU 2023 in Vienna
commonsensevision
Open-world object detection using YOLOv8 + CLIP + LLaVA + GPT-based trait reasoning to detect objects based on intent and scene context.
ml-lifecycle-visualization
Machine learning lifecycle visualization providing a checklist for steps necessary in a machine learning project
voice-based-emotion-recognition-using-ai-and-speech-processing
A deep learning project that detects human emotions from audio using MFCC feature extraction and a neural network classifier. Built using Python and TensorFlow, this tool leverages speech signal processing to predict emotions like happy, angry, or sad, helping machines better understand human sentiment.
stringerrunouttopopt
Code and results for the manuscript "Topology optimisation methodology for robust design of large composite structures"
dh_yvonne_n
An incomplete collection of Christopher Moore books, from my own library.
optitrack_broadcast
(FSC lab) calculate rigid-body velocity based on position stream from vrpn
candipore
Candida auris Variant calling workflow for both long and short reads (+parabricks)
gov.nasa.pds:mi-label
Metadata Injector for PDS Labels (MILabel) provides a command-line interface for generating PDS4 Labels using a user provided PDS4 XML template and input (source) data products.
rad_assembler
Nextflow pipeline for Reference Assisted De novo assembling whole genome shotgun sequenced viruses.
noveltree
NovelTree is a highly parallelized and computationally efficient phylogenomic workflow that infers gene families, gene family trees, species trees, and gene family evolutionary history.
ldtr
R package to implement the Landscape Dynamic Typology (LDT) method developed by Machado et al. 2018. The main purpose is to assess land use / land cover changes between several moments.
https://github.com/dincalcilab/nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
https://github.com/dincalcilab/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
awesome-engineer-design
A curated list of awesome engineer design papers, including airfoil design, 3D print, CAD design
https://github.com/dincalcilab/checkqc
CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
pairgenomealign_windowmask
New genome masking pipeline of pairwise genome alignment
assignments-3-and-later-zaransage
assignments-3-and-later-zaransage created by GitHub Classroom
mysql-mcp-server
A comprehensive Model Context Protocol (MCP) server for MySQL databases with 200+ tools for advanced database management, diagnostics, performance analysis, security auditing, and AI-powered database interactions.
https://github.com/dincalcilab/samurai-test-data
Public data files for SAMURAI tests
2025-05-19-tudelft
SWC repository. Location: University of Twente .Date: May 19-22, 2025
twinpals-modul-1
A custom made Geant4 simulation for a Positron Annihilation Lifetime Spectroscopy to generate data streams with individual event information.
nonnewtoflows
An open-source MATLAB code to analyse non-Newtonian inelastic fluids flowing in slightly tapered axisymmetric pipes.
trabalhointerdisciplinarigrejavidanova
Este repositório contém o terceiro trabalho interdisciplinar realizado no curso de Engenharia de Software, neste trabalho atendemos a necessidade de um cliente real, que necessitava de um software que o ajudasse na organização de sua Igreja
svm_python
The Support Vector Machine (SVM) is a powerful supervised learning algorithm used for classification and regression tasks. It finds the optimal hyperplane that separates data into classes with the maximum margin, making it effective for high-dimensional data and nonlinear boundaries.
rbf_bd_vba
Computational Application of Radial Basis Function Neural Networks (RBFNN) I employ radial basis functions in hidden layers, efficiently modeling complex nonlinear relationships in data. Their unique architecture enables accurate function approximation, classification, and regression, making them versatile and effective across multiple domains.
orthanc-python
This is a read-only mirror of https://hg.orthanc-server.com/orthanc-python/
rbf_vba
Computational Application of Radial Basis Function Neural Networks (RBFNN) I employ radial basis functions in hidden layers, efficiently modeling complex nonlinear relationships in data. Their unique architecture enables accurate function approximation, classification, and regression, making them versatile and effective across multiple domains.
datasets
Clone of Huggingface's datasets library with torchcodec's cuda accelerated decodec
citationrmd
This repository shows a workflow of how to include references into documents using Zotero citation styles
https://github.com/google-deepmind/spectral_inference_networks
Implementation of Spectral Inference Networks, ICLR 2019
imageomics-guide
Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows.
