xr_fresh: Automated Time Series Feature Extraction for Remote Sensing & Gridded Data • Science 93%

xr_fresh: Automated Time Series Feature Extraction for Remote Sensing & Gridded Data - Published in JOSS (2025)

Chemical Recommender System: Replacement Suggestions for Small Molecules • Science 87%

Chemical Recommender System: Replacement Suggestions for Small Molecules - Published in JOSS (2026)

SpectralUnmixing • Science 44%

Spectral unmixing, oriented towards imaging spectroscopy data. Lots of flavors included.

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control • Science 87%

MujocoROS2Control: Seamless MuJoCo Integration with ROS 2 for Robot Simulation and Control - Published in JOSS (2025)

emgflow • Science 44%

Github repository for the EMGFlow Python package.

MatrixBandwidth • Science 44%

Fast algorithms for matrix bandwidth minimization and matrix bandwidth recognition in Julia.

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination • Science 87%

WorMe: A user-oriented software for <em>Caenorhabditis elegans</em> length determination - Published in JOSS (2025)

molify: Molecular Structure Interface • Science 87%

molify: Molecular Structure Interface - Published in JOSS (2025)

dispersiveshallowwater.jl • Science 67%

A Julia library of structure-preserving numerical methods for dispersive wave equations

grepq — Peer-reviewed • Science 98%

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions - Published in JOSS (2025)

gibbonNetR — Peer-reviewed • Science 93%

gibbonNetR: an R Package for the Use of Convolutional Neural Networks for Automated Detection of Acoustic Data - Published in JOSS (2025)

gtexr — Peer-reviewed • Science 98%

gtexr: A convenient R interface to the Genotype-Tissue Expression (GTEx) Portal API - Published in JOSS (2025)

gtk-fortran — Peer-reviewed • Science 54%

gtk-fortran: a GTK+ binding to build Graphical User Interfaces in Fortran - Published in JOSS (2019)

portalcasting — Peer-reviewed • Science 59%

portalcasting: Supporting automated forecasting of rodent populations - Published in JOSS (2022)

Unishox — Peer-reviewed • Science 98%

Unishox: A hybrid encoder for Short Unicode Strings - Published in JOSS (2022)

dataaimsr — Peer-reviewed • Science 93%

dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform - Published in JOSS (2021)

chirps — Peer-reviewed • Science 93%

chirps: API Client for the CHIRPS Precipitation Data in R - Published in JOSS (2020)

iheatmapr — Peer-reviewed • Science 95%

iheatmapr: Interactive complex heatmaps in R - Published in JOSS (2017)

rnassqs — Peer-reviewed • Science 95%

rnassqs: An R package to access agricultural data via the USDA National Agricultural Statistics Service (USDA-NASS) 'Quick Stats' API - Published in JOSS (2019)

rtweet — Peer-reviewed • Science 46%

rtweet: Collecting and analyzing Twitter data - Published in JOSS (2019)

containerit — Peer-reviewed • Science 95%

containerit: Generating Dockerfiles for reproducible research with R - Published in JOSS (2019)

mitolina — Peer-reviewed • Science 93%

mitolina: MITOchondrial LINeage Analysis - Published in JOSS (2019)

nasapower — Peer-reviewed • Science 95%

nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R - Published in JOSS (2018)

weathercan — Peer-reviewed • Science 95%

weathercan: Download and format weather data from Environment and Climate Change Canada - Published in JOSS (2018)

arrgh — Peer-reviewed • Science 95%

arrgh: a Go interface to the OpenCPU R server system - Published in JOSS (2018)

High-Dimensional Integrator — Peer-reviewed • Science 95%

High-Dimensional Integrator - Published in JOSS (2017)

bomrang — Peer-reviewed • Science 59%

bomrang: Fetch Australian Government Bureau of Meteorology Data in R - Published in JOSS (2017)

eva • Science 49%

Eological evaluation assessment (EVA) tool produced in Marbefes project

pdindicator • Science 67%

Repository for the phylogenetic diversity indicator workflow as part of the B3 project.

advanced-data-analysis-on-research-publications-proyect • Science 67%

Repositorio que se usara para crear cambios en el proyecto de Inteligencia Artificial, para agrupar publicaciones cientificas por un tema en comun, conectarlos con un grafo de conocimientos e implementacion de queries

uklakes • Science 49%

Repo for uklakes R package, which allows access to data on UK CEH Lakes portal

edam-browser • Science 67%

Stand-alone, lightweight, and fast JavaScript browser for EDAM and other ontologies

blogit • Science 44%

A tool for curating Common Mark and Markdown front matter and publishing to a staging blog directory.

grainviewer • Science 49%

The official implementation of the research paper "Real-time multiscale rendering of dense dynamic stackings"

aireadi.org • Science 67%

Website of the AI-READI project

network.r2d3 • Science 44%

kartographi • Science 44%

KartoGraphI: Knowledge graph Cartography and Index

dataelementmaps • Science 67%

Common Data Element Mappings

electronic-laboratory-notebook • Science 57%

somef-core • Science 57%

A repository for a common research software metadata extractor

elm_spruce • Science 57%

Development for SPRUCE based on ELM-Peatlands

sparql-micro-service • Science 57%

SPARQL micro-services: A lightweight approach to query Web APIs with SPARQL

yes-yes-yes • Science 44%

simplified • Science 52%

An intermediate metadata model as Go struct for migrating content from EPrints 3.3. to Invenio-RDM 11

pairtree • Science 52%

A simple encoder/decoder for converting object identifiers into a Pair Tree Path (path)

projr • Science 52%

Streamline R projects

electricity-price-forecast-tft • Science 67%

Forecast of the SPOT Price in the Spanish Electricity Market with Neural Networks

e3sm • Science 57%

ssnolib • Science 44%

Python library for working with the SSNO ontology.

os_group_project • Science 67%

schrodingerapi • Science 67%

pybamm-param • Science 67%

Parameter optimisation for PyBaMM.

idealii • Science 54%

relative-difference-sets • Science 57%

Database of existence results for cyclic (m,n,k,lambda)-relative difference sets with k<=256

frs • Science 49%

Software for simulations and data analysis of FRS/Super-FRS/R3B experiments at GSI/FAIR

eph • Science 49%

Herramientas para procesamiento de la base usuaria de la EPH

harvester-curator • Science 44%

Collect metadata from a data and/or software directory and create the corresponding dataset in the data repository, DaRUS

codefair-test-repo • Science 44%

A repo for testing codefair

leslie • Science 49%

pgrdup • Science 67%

Discover Probable Duplicates in Plant Genetic Resources Collections

biocor • Science 44%

qualitymetadataspatiallandmarkdataset • Science 49%

Metadata describing and assessing the quality of spatial landmark datasets in mountain area

babette • Science 49%

babette is an R package to work with BEAST2

treeio • Science 49%

:seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

viper • Science 67%

Viral Inhibition via Peptide Engineering and Receptor-Mimicry

e3sm_rrm • Science 57%

linear-time-runs • Science 49%

tccon-caltechdata • Science 52%

Scripts for uploading TCCON data to CaltechDATA

artemis • Science 44%

Artemis is my project to create portable Oberon-07 modules that can be used in POSIX and Oberon System.

cover • Science 44%

Clustering with Overlaps in R

panako_adjusted • Science 57%

censo2017 • Science 49%

Una Base de Datos de Alto Rendimiento del Censo 2017 de Chile.

fairmq • Science 49%

C++ Message Queuing Library and Framework

beaverdam • Science 65%

Build, Explore, and Visualize Experimental Data and Metadata

gammapyxray-fork • Science 67%

treedistdata • Science 49%

Data and vignettes to accompany TreeDist packages

denjji • Science 44%

pymesa • Science 54%

Allows python to interface with MESA

stngo • Science 44%

Golang implementation of Simple Timesheet Notation.

myradex • Science 49%

Similar to radex, with a different way to solve the statistical equilibrium problem

cookiecutter-web-backend • Science 44%

Backend for cookiecutter-web

primarycensored • Science 67%

Primary event censored distributions.

resample_zarr • Science 49%

Package for resampling large zarr datasets to lower resolution.

shexml • Science 67%

A heterogeneous data mapping language based on Shape Expressions

irdm-queue-portal • Science 65%

A basic view of content currently in an InvenioRDM community queue

trellis • Science 44%

Trellis visualization using Python, matplotlib, pandas, and scipy

dendronetwork • Science 67%

Package to create dendrochronological networks

onefinestardust • Science 44%

Config files for my GitHub profile.

photosearcher • Science 49%

Searches Flickr for photographs and metadata

codemeticulous • Science 44%

practical validation and conversion between software metadata standards with pydantic

dhcurve • Science 44%

An R package for automated modelling of diameter-height relations for trees

rpcss • Science 67%

Constitution of Core Collections by Principal Component Scoring Strategy

fairdataihub-bot • Science 67%

A GitHub App that automates some of the tasks in the FAIR Data Innovations Hub GitHub organization

php-codemeta-crosswalk • Science 49%

Codemeta conversions - https://doi.org/10.5281/zenodo.12808884

slides24sta5077z • Science 44%

models • Science 52%

This is a Go package used to describe data models aligned with the HTML5 data types.

gammashiny • Science 49%

Shiny Applications for the R Package gamma

dmaog • Science 67%

Data Mapping Access Objects Generator

spacetime-sym • Science 57%

Spacetime symmetry

biocor • Science 44%

This is a read-only mirror of the git repos at https://bioconductor.org