GitHub
hereditary-stratigraph-concept
Proof of concept work for hereditary stratigraph method
https://github.com/lromul/nvidia-docker-makefile
An example of using nvidia-docker with Makefile
constants-float32-max-base10-exponent
The maximum base 10 exponent for a single-precision floating-point number.
single-cell-r-training
SIB course on single cell transcriptomics by mostly using the Seurat pipeline
hlb-cifar10
Train to 94% on CIFAR-10 in <6.3 seconds on a single A100. Or ~95.79% in ~110 seconds (or less!)
path2ppi
This is a read-only mirror of the git repos at https://bioconductor.org
https://github.com/fgcz/specl
prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
langchain-chatbot
AI Chatbot for analyzing/extracting information from data in conversational format.
orthanc-authorization
This is a read-only mirror of https://hg.orthanc-server.com/orthanc-authorization/
torchgeo
TorchGeo: datasets, samplers, transforms, and pre-trained models for geospatial data
core-performance-openmp
Measure the performance of individual cores with OpenMP.
phip-seq-tp-vac
Pipeline for analysis of the Treponema pallidum PhiP-Seq assay data @ Greninger Lab
btc-spatial-pipelines
Nextflow spatial pipelines (for Spatial Transcriptomics, IMC, etc.)
atavide_lite
A simpler version of atavide that relies only on slurm or PBS scripts. Some of the settings are specific for our compute resources
https://github.com/fgcz/fcc
An automated rule-based processing tool for life science data.
https://github.com/deeprine/transformer
transformer(Attention Is All You Need) pytorch implemented
diaper
De Data-InfrAstructure for ParEnts and ChildRen, DIAPER is geschikt voor onderzoek rondom geboortezorg, zwangerschap en bevalling, en de eerste jaren van het leven. Het RIVM gebruikt DIAPER voor verschillende monitors in de geboortezorg.
hipiler
Visual exploration of large genome interaction matrices with interactive small multiples.
xai-proteins
Insights into the inner workings of transformer models for protein function prediction
rrmm
Data analysis scripts for scRNA-seq analysis of relapsed and refractory multiple myeloma
electrogenomics-group.github.io
“Electrogenomics” group was established in 2015 by Professors Munroe, Lambiase and Tinker. This is a collaboration between the William Harvey Research Centre at QMUL and UCL’s Institute of Cardiovascular Science. We joined forces in a broad scale attempt to unravel the electrical and genetic causes of cardiovascular mortality.
https://github.com/ivoschulthess/protonnmr_dressedstates
Repository containing the data and the analysis for the publication of the dressed spin states measurements using the Proton NMR apparatus.
pta-bergsas-presentation
Presentation for BergSAS course: “Digital Methods and Instruments of the ZGAW” (SS 2025)
https://github.com/lromul/kaggle-planet-amazon
Solution for Kaggle competition "Planet: Understanding the Amazon from Space"
gemelosdigitales-analisis-desistemas-biologicos
Practica 5. Analisis de Sistemas Biologicos
phylophoenix
🔥🌿🐦🔥PhyloPHoeNIx: Pipeline for relatedness determination using PHoeNIx output.
https://github.com/fgcz/iscb2017
This R package contains data and vignette files for a Pigeon Pea (Cajanus cajan) project from a Indo-Swiss Collaboration in Biotechnology (ISCB) training course on proteome informatics given from January 21th to January 25th 2017 at the National Research Centre on Plant Biotechnology (NRCPB) in New Delhi-110012 by JG, WEW, and CP.
gitprojecthealth
A Mining Software Repository and Ticket management Platform tool, in Pharo
allophant
A multilingual phoneme recognizer capable of generalizing zero-shot to unseen phoneme inventories.
kinesis
shiny Applications for the tesselle R Packages - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/kinesis
stars-reproduce-huang-2019
Assessing the computational reproducibility of Huang et al. 2019 as part of STARS.
plantilla-colecciones
Plantilla para construir sitios estáticos para colecciones documentales, desarrollada por el HD LAB-CONICET.
stars-reproduce-shoaib-2022
Assessing the computational reproducibility of Shoaib and Ramamohan 2022 as part of STARS.
npp-product-comparison
MATLAB scripts to identify the optimal net primary production (NPP) model by comparing with in situ 14C data from time-series stations.
pfr
Repository for formalization of the Polynomial Freiman Ruzsa conjecture (and related results)
https://github.com/dcan-labs/abcd-t1reg
A citizen science game for ABCD Study Quality Control of anatomical image registration.
latent_dirichlet_allocation
Topic modeling (LDA) extracts latent topics distributed across documents and represent them with most likely words.
