GitHub
findmyroomie
FindMyRoomie is a Web Application that provides a platform for lonely wolves (NC State students) to find roommates of their preference.
gaitmonitoringforparkinsonsdiseasepatients
To monitor gait patterns to detect freezing of gait. Done as part of the Singapore Science Mentorship Programme + CS4131 module + extended.
influencenetworks
Source code for the paper Influence Networks: Bayesian Modelling and Diffusion
colibri
Communication Library for Research Prototyping - Allows object synchronization, networking, and voice chat with little to no code required
vaspberry
Berry curvature and Chern number calculations with the output (WAVECAR) of VASP code
hop
[ICCV 2023] Temporal Enhanced Training of Multi-view 3D Object Detector via Historical Object Prediction
text_summarization_lstm_gru
# Comparing the performance of LSTM and GRU for Text Summarization using Pointer Generator Networks
tno.fl.protocols.cox-regression
TNO PET Lab - Federated Learning (FL) - Protocols - Cox Regression
https://github.com/kull-centre/_2025_pedersen_prkn_bag6
BAG6 and RNF126 are broadly involved in protein quality control of non-native missense protein variants
https://github.com/kuleuven-cosic/eevee
The Eevee Family of AEAD modes for IoT-friendly encryption and MPC-friendly decryption
https://github.com/kull-centre/_2025_voutsinos_degron_cytosol
A complete map of human cytosolic degrons and characterization of their exposure and relevance for disease
https://github.com/kull-centre/colabcalvados
Jupyter Notebook on Google Colaboratory to generate and refine protein conformational ensembles from CALVADOS simulations
https://github.com/kull-centre/_2025_larsen_degron_transcriptionfactors
Scripts and output from "Comprehensive degron mapping in human transcription factors"
https://github.com/kull-centre/prism
Software development pipelines related to the PRISM project
https://github.com/kull-centre/_2024_larsen-ledet_mlh1
data and scripts for "Disentangling the mutational effects on protein stability and interaction of human MLH1"
https://github.com/kull-centre/_2023_theisen_molecular_switching
Data files related to "Molecular switching in transcription through splicing and proline-isomerization regulates stress responses in plants" by Theisen et al. 2023
https://github.com/kull-centre/_2022_groenbaek-thygesen_aspa_mave
Scripts and data for Grønbæk-Thygesen et al
https://github.com/kull-centre/_2022_norrild_gmma_trx
Increasing protein stability by inferring substitution effects from high-throughput experiments
https://github.com/kumawatb/lifefromscratch
An implementation of Tim Hutton's Squirm3 artificial chemistry in Rust
https://github.com/kumiori/variational-jumps
Theoretical and numerical study of jump transitions in constrained variational evolution problems.
https://github.com/kumiori/indiscrete
How do elementary systems evolve, under irreversibility constraints?
https://github.com/kunalshah03/rufus
Rufus - Intelligent Web Scraper for RAG Systems
https://github.com/kunalshah03/darknet
YOLOv4 / Scaled-YOLOv4 / YOLO - Neural Networks for Object Detection (Windows and Linux version of Darknet )
https://github.com/kundajelab/procapnet
Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.
https://github.com/kundajelab/immuneclip
CLIP-based model for aligning epitopes to immune receptors
https://github.com/kundajelab/fastism
In-silico Saturation Mutagenesis implementation with 10x or more speedup for certain architectures.
https://github.com/kundajelab/retina-design
Designing AAV sequences for retinal cell types (with scATAC-seq models)
https://github.com/kundajelab/apricot
apricot implements submodular optimization for the purpose of selecting subsets of massive data sets to train machine learning models quickly.
https://github.com/kundajelab/alzheimers_parkinsons
Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis
https://github.com/kundajelab/1kg_ld_utils
utils/notes for LD calculation from 1000 genomes panel
https://github.com/kunpai/acadhashiru
The Expert Orchestrator AI: Dynamically Adapting, Budget-Aware, and Precisely Tailored to Your Needs
https://github.com/kundajelab/pybigwig
A python extension for quick access to bigWig files
https://github.com/kundajelab/neural_motif_discovery
Framework for interrogating transcription-factor motifs and their syntax/grammars from neural-network interpretations
https://github.com/kundajelab/chromdragonn
Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellular contexts"
https://github.com/kundajelab/3dchromatin_replicateqc
Software to compute reproducibility and quality scores for Hi-C data