Scientific Software
Updated 10 months ago

HyperNetX — Peer-reviewed • Rank 18.7 • Science 100%

HyperNetX: A Python package for modeling complex network data as hypergraphs - Published in JOSS (2024)

Mathematics Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Updated 10 months ago

biochatter • Rank 15.0 • Science 77%

Backend library for conversational AI in biomedicine

Updated 10 months ago

kglab • Rank 15.8 • Science 67%

Graph Data Science: an abstraction layer in Python for building knowledge graphs, integrated with popular graph libraries – atop Pandas, NetworkX, RAPIDS, RDFlib, pySHACL, PyVis, morph-kgc, pslpython, pyarrow, etc.

Updated 10 months ago

mapeathor • Rank 11.5 • Science 67%

Translator of spreadsheet mappings into R2RML, RML or YARRRML

Updated 10 months ago

yatter • Rank 11.3 • Science 67%

Translate YARRRML into easy-to-read [R2]RML mappings

Updated 10 months ago

travshacl • Rank 9.9 • Science 67%

A SHACL validator capable of planning the traversal and execution of the validation of a shape schema to detect violations early.

Updated 10 months ago

morph-kgc • Rank 8.0 • Science 67%

Powerful RDF Knowledge Graph Generation with RML Mappings

Updated 10 months ago

knowledge-graph-language • Rank 5.0 • Science 67%

A query language for exploring knowledge graphs.

Updated 10 months ago

deepsearch-toolkit • Rank 16.5 • Science 54%

Interact with the Deep Search platform for new knowledge explorations and discoveries

Updated 10 months ago

lubm4obda • Rank 2.8 • Science 67%

Inference and Meta Knowledge Benchmarking of OBDA Systems

Updated 10 months ago

noria-ontology • Rank 3.8 • Science 57%

The NORIA-O project is a data model for IT networks, events and operations information. The ontology is developed using web technologies (e.g. RDF, OWL, SKOS) and is intended as a structure for realizing an IT Service Management (ITSM) Knowledge Graph (KG) for Anomaly Detection (AD) and Risk Management applications. The model has been developed in collaboration with operational teams, and in connection with third parties linked vocabularies.

Updated 10 months ago

awesome-drug-discovery-knowledge-graphs • Rank 6.6 • Science 54%

A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of biomedical datasets relating to drug discovery: a knowledge graph perspective" (Briefings in Bioinformatics, 2022)

Updated 10 months ago

koza • Rank 15.9 • Science 44%

Data transformation framework for LinkML data models

Updated 10 months ago

knowurenvironment • Rank 2.4 • Science 44%

Official release of KnowUREnvironment, a knowledge graph on climate change and related environmental issues. Paper link: https://www.climatechange.ai/papers/aaaifss2022/3

Updated 10 months ago

jsonschema2shacl • Rank 2.2 • Science 44%

A Python program that creates SHACL shapes from JSON Schema

Updated 10 months ago

flex-rml • Science 67%

FlexRML: A Memory-Efficient Interpreter for RML.

Updated 10 months ago

burp • Science 67%

A Basic and Unassuming RML Processor

Updated 10 months ago

oeg-software-graph • Science 54%

Knowledge graph containing the catalog of software from the oeg-upm organization in GitHub

Updated 10 months ago

renku • Science 44%

Renku provides a platform and tools for reproducible and collaborative data analysis.

Updated 10 months ago

autocimkg • Science 67%

Automatic Construction and Incremental Maintenance of Knowledge Graphs

Updated 10 months ago

contract-knowledge-base • Science 18%

A functional knowledge base of popular contracts utilized in GitHub. Built for a class project in Knowledge Reasoning and Representation (KRR).

Updated 10 months ago

kgem-in-drug-discovery • Science 67%

Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence in the Life Sciences, 2022)

Updated 10 months ago

sac2kg • Science 67%

A Python package for generating RDF knowledge graphs based on the Volcano Event Ontology VEO.

Updated 10 months ago

mpox-kg • Science 65%

Source code and data repository for paper titled "Monkeypox Knowledge Graph: A comprehensive representation embedding chemical entities and associated biology of Monkeypox "

Updated 10 months ago

redkg • Science 31%

Reinforcement learning on dynamic knowledge graphs

Updated 10 months ago

awesome-llms • Science 44%

🤓 A collection of AWESOME structured summaries of Large Language Models (LLMs)

Updated 10 months ago

abecto • Science 75%

An ABox Evaluation and Comparison Tool for Ontologies.

Updated 10 months ago

openspg-kag • Science 54%

OpenSPG is a Knowledge Graph Engine developed by Ant Group in collaboration with OpenKG, based on the SPG (Semantic-enhanced Programmable Graph) framework. Core Capabilities: 1) domain model constrained knowledge modeling, 2) facts and logic fused representation, 3) natively support KAG...

Updated 10 months ago

graphg • Science 54%

GraphGen: Enhancing Supervised Fine-Tuning for LLMs with Knowledge-Driven Synthetic Data Generation

Updated 10 months ago

grape • Science 44%

GRAPE: Guiding RML Authoring with an MPS based Projectional Editor.

Updated 10 months ago

ontouml-json2graph • Science 67%

Decode a ontouml-schema compliant JSON in an ontouml-metamodel-vocabulary compliant knowledge graph

Updated 10 months ago

pegazus-ontology • Science 57%

PeGaZus ontology and knowledge graph based approach to build urban historical gazetteers. Presented at EKAW 2024.

Updated 10 months ago

dseco • Science 44%

The DSecO project is a data model for representing and reasoning on Domain Name System (DNS) data. The ontology is developed using web technologies (e.g. RDF, OWL, SKOS) and is intended as a structure for realizing a DNS Knowledge Graph (KG) for administration and security assessment applications.

Updated 10 months ago

phenomics-assistant • Science 44%

LLM retrieval augmented generation agent for the Monarch Knowledge graph.

Updated 10 months ago

clep • Science 67%

🤖 A Python Package for generating new patient representations driven by data and prior knowledge

Updated 10 months ago

biomedical-kg-topological-imbalance • Science 67%

Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in Bioinformatics, 2022)

Updated 10 months ago

mathmoddb • Science 67%

The repo for MathModDB, the model ontology and knowledge graph developed by MaRDI TA4

Updated 10 months ago

midi2vec • Science 67%

MIDI2vec computes embeddings for representing MIDI data in vector space

Updated 10 months ago

knowledge-based-qa-for-diagnosis • Science 44%

Knowledge Graph,Question Answering System. 基于知识图谱的医疗诊断问答系统

Updated 10 months ago

coursegraph • Science 44%

使用大模型自动构建课程知识图谱

Updated 10 months ago

podio • Science 44%

Ontology designed to formalize the dissemination of political discourse in digital media.

Updated 10 months ago

etl • Science 44%

LinkedPipes ETL is an RDF based, lightweight ETL tool