Intracranial Electrode Location and Analysis in MNE-Python
Intracranial Electrode Location and Analysis in MNE-Python - Published in JOSS (2022)
sourmash v4
sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets - Published in JOSS (2024)
qnm
qnm: A Python package for calculating Kerr quasinormal modes, separation constants, and spherical-spheroidal mixing coefficients - Published in JOSS (2019)
DSSE
DSSE: An environment for simulation of reinforcement learning-empowered drone swarm maritime search and rescue missions - Published in JOSS (2024)
Gala
Gala: A Python package for galactic dynamics - Published in JOSS (2017)
cfdm
cfdm: A Python reference implementation of the CF data model - Published in JOSS (2020)
SLEPLET
SLEPLET: Slepian Scale-Discretised Wavelets in Python - Published in JOSS (2023)
forestatrisk
forestatrisk: a Python package for modelling and forecasting deforestation in the tropics - Published in JOSS (2021)
Pyret
Pyret: A Python package for analysis of neurophysiology data - Published in JOSS (2017)
StreamGen
StreamGen: a Python framework for generating streams of labeled data - Published in JOSS (2024)
approxposterior
approxposterior: Approximate Posterior Distributions in Python - Published in JOSS (2018)
stanscofi and benchscofi
stanscofi and benchscofi: a new standard for drug repurposing by collaborative filtering - Published in JOSS (2024)
Ethical Smart Grid
Ethical Smart Grid: a Gym environment for learning ethical behaviours - Published in JOSS (2023)
buildH
buildH: Build hydrogen atoms from united-atom molecular dynamics of lipids and calculate the order parameters - Published in JOSS (2021)
Lcopt - An interactive tool for creating fully parameterised Life Cycle Assessment (LCA) foreground models
Lcopt - An interactive tool for creating fully parameterised Life Cycle Assessment (LCA) foreground models - Published in JOSS (2017)
DE-Sim
DE-Sim: an object-oriented, discrete-event simulation tool for data-intensive modeling of complex systems in Python - Published in JOSS (2020)
MiSTree
MiSTree: a Python package for constructing and analysing Minimum Spanning Trees - Published in JOSS (2019)
graphenv
graphenv: a Python library for reinforcement learning on graph search spaces - Published in JOSS (2022)
treemaker
treemaker: A Python tool for constructing a Newick formatted tree from a set of classifications. - Published in JOSS (2018)
easyvvuq
Python 3 framework to facilitate verification, validation and uncertainty quantification (VVUQ) for a wide variety of simulations.
commonpy
Collection of common Python utility functions and classes used in other Caltech Library programs.
eprints2archives
Send records from an EPrints server to the Internet Archive and other web archives
spyrit
A Python toolbox for deep image reconstruction, with emphasis on single-pixel imaging.
msapy
Hopefully, a compact and general-purpose Python package for Multiperturbation Shapley value Analysis (MSA).
colibri-core
Colibri core is an NLP tool as well as a C++ and Python library for working with basic linguistic constructions such as n-grams and skipgrams (i.e patterns with one or more gaps, either of fixed or dynamic size) in a quick and memory-efficient way. At the core is the tool ``colibri-patternmodeller`` whi ch allows you to build, view, manipulate and query pattern models.
dmt-core
DeviceModelingToolkit (DMT) is a Python tool targeted at helping modeling engineers extract model parameters, run circuit and TCAD simulations and automate their infrastructure.
clam
Quickly turn command-line applications into RESTful webservices with a web-application front-end. You provide a specification of your command line application, its input, output and parameters, and CLAM wraps around your application to form a fully fledged RESTful webservice.
handprint
Apply different text recognition services to images of handwritten documents.
dibs
DIBS is an implementation of a basic controlled digital lending (CDL) system using IIIF to make scanned books available for time-limited viewing.
global-chem
A Knowledge Graph of Common Chemical Names to their Molecular Definition
nbbdd
BDD for Jupyter Notebooks. Hackday project at SSI Collaborations Workshop 2020. #CollabW2020
word2doc2vec-doc-relevance
An approach exploring and assessing literature-based doc-2-doc recommendations using word2vec combined with doc2vec, and applying it to TREC and RELISH datasets
psi4
Open-Source Quantum Chemistry – an electronic structure package in C++ driven by Python
astroplasma
A Cloudy database with functions to quickly interpolate physical state of astrophysical plasma without detailed Plasma modelling
tutorials
Jupyter Notebook tutorials using astronomical databases and virtual observatory tools
fair-python-cookiecutter-demo
Live demo to demonstrate a repository created from the fair-python-cookiecutter template.
architxt
ArchiTXT is an open source Python library that transforms unstructured text into structured, searchable, and AI-ready data. It enables automated database generation and seamless data integration.
python4datascience
Teaching materials for the cusy training courses on Python-based data science workflows: https://cusy.io/en/seminars
ipd
All about Iterated Prisoner's Dilemma. Python code and jupyter notebooks. See how to build new strategies and evaluate them.
doc2vec-doc-relevance
An approach exploring and assessing literature-based doc-2-doc recommendations using a doc2vec and applying to the RELISH dataset.
dataverse-curation-assistant
A small software application that provides a UI for automating things in repositories that use the Dataverse software
benchscofi
Package which contains implementations of published collaborative filtering-based algorithms for drug repurposing.
wmd-word2vec
An approach exploring and assessing literature-based doc-2-doc recommendations using word2vec and word mover's distance and applying it to RELISH dataset.
dirschema
Spec and validator for directories, files and metadata based on JSON Schema and regexes.
