Updated 10 months ago

enhancing_reaxff • Rank 3.2 • Science 67%

Jupyter notebooks used for retraining the ReaxFF force field for the inorganic compound LiF.

Updated 10 months ago

enhancing_reaxff_dft_database • Rank 2.9 • Science 67%

Database used for retraining the ReaxFF force field for the inorganic compound LiF.

Updated 10 months ago

lls-core • Rank 12.2 • Science 57%

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

Updated 10 months ago

phys2cvr • Rank 10.0 • Science 59%

python module to compute cerebrovascular reactivity mapping and other related maps

Updated 10 months ago

scikit-survival • Rank 22.3 • Science 46%

Survival analysis built on top of scikit-learn

Updated 10 months ago

nimpa • Rank 8.8 • Science 59%

NiftyPET: Neuro-Image Manipulation, Processing and Analysis

Updated 10 months ago

pbxplore • Rank 8.8 • Science 59%

A suite of tools to explore protein structures with Protein Blocks :snake:

Updated 10 months ago

xemc3 • Rank 8.5 • Science 59%

A library for working with EMC3 simulations using the xarray framework.

Updated 10 months ago

pyjams • Rank 8.5 • Science 59%

A general Python package with miscellaneous utility functions used in several other packages.

Updated 10 months ago

diffsims • Rank 7.5 • Science 59%

An open-source Python library providing utilities for simulating diffraction

Updated 10 months ago

ads2inspire • Rank 7.3 • Science 59%

Replace ADS citations with the appropriate INSPIRE ones in latex and bibtex

Updated 10 months ago

omc3 • Rank 7.1 • Science 59%

Python 3 codes for beam optics measurements and corrections in circular particle accelerators

Updated 10 months ago

qnorm • Rank 12.0 • Science 54%

Fast-ish (and correct!) quantile normalization in Python.

Updated 10 months ago

pylhc-submitter • Rank 7.0 • Science 59%

Utility HTCondor submitter for parametrized studies

Updated 10 months ago

PyMNE • Rank 7.0 • Science 59%

Julia interface to MNE-Python via PythonCall

Scientific Software
Updated 10 months ago

Capytaine — Peer-reviewed • Rank 16.4 • Science 49%

Capytaine: a Python-based linear potential flow solver - Published in JOSS (2019)

Earth and Environmental Sciences Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

Water Systems Integrated Modelling framework, WSIMOD — Peer-reviewed • Rank 6.0 • Science 59%

Water Systems Integrated Modelling framework, WSIMOD: A Python package for integrated modelling of water quality and quantity across the water cycle - Published in JOSS (2023)

Political Science
Scientific Software · Peer-reviewed
Updated 10 months ago

ural • Rank 15.3 • Science 49%

A helper library full of URL-related heuristics.

Updated 10 months ago

tensorflow-mri • Rank 5.1 • Science 59%

A Library of TensorFlow Operators for Computational MRI

Updated 10 months ago

pylhc • Rank 4.0 • Science 59%

Additional tools for particle accelerator data analysis and machine information

Updated 10 months ago

tinytext • Rank 13.9 • Science 49%

Convert your text ᶦᶰᵗᵒ ᵗᶦᶰᶦᵉʳ ᵗᵉˣᵗ

Updated 10 months ago

adaptive • Rank 20.8 • Science 39%

:chart_with_upwards_trend: Adaptive: parallel active learning of mathematical functions

Updated 10 months ago

pyramid-twitcher • Rank 10.8 • Science 49%

Security Proxy for Web Processing Services (WPS)

Updated 10 months ago

ramanchada2 • Rank 10.6 • Science 49%

A library for Raman spectroscopy harmonization

Updated 10 months ago

svgdigitizer • Rank 10.5 • Science 49%

(x,y) Data Points from SVG files

Updated 10 months ago

pymare • Rank 13.2 • Science 46%

PyMARE: Python Meta-Analysis & Regression Engine

Updated 10 months ago

nigsp • Rank 10.2 • Science 49%

NiGSP: a module for graph signal processing on neuroimaging data

Updated 10 months ago

swan • Rank 4.8 • Science 54%

Statistical models to predict new materials

Updated 10 months ago

panda-gazebo • Rank 4.7 • Science 54%

A reinforcement learning-oriented Panda Emika Franka gazebo simulation.

Updated 10 months ago

minet • Rank 9.2 • Science 49%

A webmining CLI tool & library for python.

Updated 10 months ago

sbmlutils • Rank 12.1 • Science 46%

Python utilities for SBML

Updated 10 months ago

turn_by_turn • Rank 8.8 • Science 49%

I/O functionality for turn-by-turn BPM measurements data from different particle accelerators

Updated 10 months ago

olsen-randerson • Rank 0.7 • Science 57%

Functions to perform the carbon dioxide flux temporal downscaling described in Olsen and Randerson (2004) and modifications from Fisher et al. (2016)

Updated 10 months ago

optics_functions • Rank 11.7 • Science 46%

Calculate various beam optics functions from TfsDataFrames

Updated 10 months ago

gfort2py • Rank 11.1 • Science 46%

Library to allow calling fortran code from python

Updated 10 months ago

pythea • Rank 7.8 • Science 49%

PyThea is an open-source software package to perform coronal mass ejection (CME) and shock wave 3D reconstruction using multi-viewpoint remote-sensing observations.

Updated 10 months ago

birdhouse-deploy • Rank 7.5 • Science 49%

Scripts and configurations to deploy the various birds and servers required for a full-fledged production platform

Updated 10 months ago

libsbgnpy • Rank 7.2 • Science 49%

Python library for SBGN

Updated 10 months ago

generic_parser • Rank 9.7 • Science 46%

A parser for arguments and config files that also allows direct Python input and recursive parsing

Updated 10 months ago

pysatmissions • Rank 9.4 • Science 46%

Mission planning instrument tools for pysat

Scientific Software
Updated 10 months ago

TriP — Peer-reviewed • Rank 5.7 • Science 49%

TriP: A Python package for the kinematic modeling of serial-parallel hybrid robots - Published in JOSS (2022)

Updated 10 months ago

csg_mri_pipelines • Rank 4.0 • Science 49%

MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness

Updated 10 months ago

pysatseasons • Rank 6.4 • Science 46%

Seasonal Analysis routines for pysat

Updated 10 months ago

pysatspaceweather • Rank 4.7 • Science 46%

pysat support for space weather indices and data sets

Updated 10 months ago

python-package-guide • Rank 7.9 • Science 36%

Python packaging made simple. Recommendations & guidance curated by the pyOpenSci community

Updated 10 months ago

pysatmodels • Rank 6.8 • Science 36%

Interface for model analysis and model-data comparisons within the pysat ecosystem

Updated 10 months ago

birdy • Rank 12.1 • Science 26%

Birdy provides a command-line tool to work with Web Processing Services.

Updated 10 months ago

pyglotaran-extras • Rank 9.8 • Science 26%

Extra batteries to super-charge pyglotaran's plotting capabilities.

Updated 10 months ago

p2108-python • Science 54%

Python wrapper for U.S. Reference Software Implementation of Recommendation ITU-R P.2108

Updated 10 months ago

4cat • Science 49%

The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms.

Updated 10 months ago

cdm-reader-mapper • Science 49%

Common Data Model reader and mapper toolbox

Updated 10 months ago

python • Science 54%

Equator Education with Python

Updated 10 months ago

ieeh-power-system-data-model • Science 75%

A hierarchical data model for the description of electrical power systems.

Updated 10 months ago

code • Science 36%

This repository combines all the code written for or used in the EMPIR project 17IND12 Metrology for the Factory of the Future to enable pulling/cloning all the code and all coding related documents at once.

Updated 10 months ago

pyamrex • Science 39%

GPU-Enabled, Zero-Copy AMReX Python Bindings including AI/ML

Updated 10 months ago

amuse • Science 49%

Astrophysical Multipurpose Software Environment. This is the main repository for AMUSE

Updated 10 months ago

eminus • Science 67%

Pythonic electronic structure theory.

Updated 10 months ago

cloud-info-provider • Science 26%

EGI Cloud Information System Provider

Updated 10 months ago

mepo • Science 36%

Tool to manage (m)ultiple git r(epo)sitories

Updated 10 months ago

cosima-recipes • Science 59%

A cookbook 📒 of recipes (i.e., examples) for analysing ocean and sea ice model output. 👩🏽‍🍳🌊👨🏻‍🍳

Updated 10 months ago

index_calculator • Science 49%

Calculate climate indicators based on xclim

Updated 10 months ago

dhdt • Science 44%

Extracting topography from mountain glaciers, through the use of shadow casted by surrounding mountains.

Updated 10 months ago

grikod • Science 67%

İkili sayıları Gri Koda çevirir. Grikod converts binary numbers to Gray Code.

Updated 10 months ago

tardis-sn • Science 49%

TARDIS - Temperature And Radiative Diffusion In Supernovae

Updated 10 months ago

paper-mlwa-mlpro-2.0 • Science 57%

Paper ScienceDirect MLWA - Arend e.a. - "MLPro 2.0 - Online machine learning in Python"

Updated 10 months ago

pysces • Science 67%

The official PySCeS project source code repository.

Updated 10 months ago

lfmf-python • Science 54%

Python wrapper for the NTIA/ITS implementation of the Low Frequency / Medium Frequency (LF/MF) Propagation Model. LF/MF predicts basic transmission loss in the frequency range 0.01 - 30 MHz for propagation paths over a smooth Earth and antenna heights less than 50 meters.

Updated 10 months ago

pycottas • Science 49%

Python COTTAS library for compressing and querying RDF

Updated 10 months ago

pydmd • Science 49%

Python Dynamic Mode Decomposition

Updated 10 months ago

mcplot • Science 49%

A Python package with a plotting class and routines for publication-ready graphics

Updated 10 months ago

matilda • Science 77%

Tool for modeling water resources in glacierized catchments. Combines a temperature-index melt model with the conceptual catchment model HBV and a parameterized glacier area/volume re-scaling routine.

Updated 10 months ago

nibabel • Science 49%

Python package to access a cacophony of neuro-imaging file formats

Updated 10 months ago

psrdada-python • Science 54%

Python bindings to the PSRDada ringbuffer implementation

Updated 10 months ago

bluepyefe • Science 67%

BluePyEfe: Blue Brain Python E-feature extraction

Updated 10 months ago

powerfactory-tools • Science 75%

A Python toolbox for the (external) control of DIgSILENT PowerFactory.

Updated 10 months ago

pymesa • Science 54%

Allows python to interface with MESA

Updated 10 months ago

tutorials • Science 36%

Jupyter Notebook tutorials using astronomical databases and virtual observatory tools

Updated 10 months ago

benchscofi • Science 67%

Package which contains implementations of published collaborative filtering-based algorithms for drug repurposing.

Updated 10 months ago

motila • Science 67%

Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data

Updated 10 months ago

code_to_pinner_et_al_2025 • Science 67%

Analysis code to Pinner et al., 2025