Scientific Software
Updated 10 months ago

MitoHEAR — Peer-reviewed • Rank 1.4 • Science 95%

MitoHEAR: an R package for the estimation and downstream statistical analysis of the mitochondrial DNA heteroplasmy calculated from single-cell datasets - Published in JOSS (2022)

Scientific Software · Peer-reviewed
Updated 10 months ago

codonu • Rank 3.8 • Science 67%

A python project for analysis of codon usage for gene or genome analysis

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pbxplore • Rank 8.8 • Science 59%

A suite of tools to explore protein structures with Protein Blocks :snake:

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degronopedia-ml-psi • Science 67%

Predict Protein Stability Index from the sequence

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bs_assign • Science 54%

Find groups of motifs around genomic landmarks of interest

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minmutfinder • Science 44%

Tool written in Python and Bash implemented in a Nextflow pipeline that accurately identifies mutations and assesses their frequencies, accounting for multiple nucleotide mutations occurring within a single codon. Additionally, it can annotate mutations associated to phenotypical changes in viral populations based on user-supplied datasets.

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https://github.com/ahmedmoustafa/als • Science 10%

Analysis of the gut microbiome of Amyotrophic Lateral Sclerosis (ALS) patients using the DADA2 workflow

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peka • Science 49%

Find motifs enriched around prominent crosslinks

Updated 10 months ago

https://github.com/batoolmm/mitohear • Science 23%

MitoHEAR (Mitochondrial HEteroplasmy AnalyzeR) is an R package that allows the estimation as well as downstream statistical analysis of the mtDNA heteroplasmy calculated from single-cell datasets.