Projects

Updated 6 months ago

odak • Rank 12.7 • Science 46%

Scientific computing library for optics, computer graphics and visual perception.

cluster-computing color computational-display computational-imaging computational-optics computer-generated-holography computer-graphics deep-learning holography jones-calculus lensless machine-learning numpy odak optics perception python pytorch raytracing wave-optics

Updated 6 months ago

slurmfun • Science 44%

MATLAB tools to submit jobs into SLURM

cluster-computing hpc matlab slurm

Updated 6 months ago

tomobear • Science 67%

TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.

alignment automated cluster cluster-computing cryo-em cryo-et cryoem cryoet em et parallel parallel-computing particle-picking pipeline processing reconstruction structural-biology tem template-matching tomography

Updated 6 months ago

dei-blade-template • Science 44%

A project template to run experiments on the DEI's Blade cluster

cluster-computing python slurm template

Updated 6 months ago

geoslicer • Science 39%

Open source digital rocks software platform for micro-CT, CT, thin sections and borehole image analysis. Includes tools for: annotation, AI, HPC, porous media flow simulation, porosity analysis, permeability analysis and much more.

absolute-permeability artificial-intelligence cluster-computing computer-vision dicom-images digital-rocks dlis hdf5 high-performance-computing las netcdf permeability pore-network porespy porosity-analysis porous-media porous-media-flow raw-image relative-permeability slurm-cluster

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Open Source Science

odak • Rank 12.7 • Science 46%

slurmfun • Science 44%

tomobear • Science 67%

dei-blade-template • Science 44%

geoslicer • Science 39%