Scientific Software
Updated 6 months ago

libCEED — Peer-reviewed • Rank 18.8 • Science 100%

libCEED: Fast algebra for high-order element-based discretizations - Published in JOSS (2021)

Economics (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

The drake R package — Peer-reviewed • Rank 22.7 • Science 95%

The drake R package: a pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2018)

Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

The targets R package — Peer-reviewed • Rank 22.4 • Science 95%

The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2021)

Engineering Sociology Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

mpi4jax — Peer-reviewed • Rank 14.6 • Science 100%

mpi4jax: Zero-copy MPI communication of JAX arrays - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

torchquad — Peer-reviewed • Rank 14.3 • Science 100%

torchquad: Numerical Integration in Arbitrary Dimensions with PyTorch - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

Monte Carlo / Dynamic Code (MC/DC) — Peer-reviewed • Rank 12.1 • Science 100%

Monte Carlo / Dynamic Code (MC/DC): An accelerated Python package for fully transient neutron transport and rapid methods development - Published in JOSS (2024)

Scientific Software
Updated 6 months ago

AMReX — Peer-reviewed • Rank 12.0 • Science 100%

AMReX: a framework for block-structured adaptive mesh refinement - Published in JOSS (2019)

Scientific Software
Updated 6 months ago

Cabana — Peer-reviewed • Rank 10.8 • Science 100%

Cabana: A Performance Portable Library for Particle-Based Simulations - Published in JOSS (2022)

Scientific Software
Updated 6 months ago

t8code - modular adaptive mesh refinement in the exascale era — Peer-reviewed • Rank 10.8 • Science 100%

t8code - modular adaptive mesh refinement in the exascale era - Published in JOSS (2025)

Materials Science (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

MPTRAC — Peer-reviewed • Rank 7.7 • Science 98%

MPTRAC: A high-performance Lagrangian transport model for atmospheric air parcel dispersion - Published in JOSS (2025)

Artificial Intelligence and Machine Learning (40%) Materials Science (40%) Political Science (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

madupite — Peer-reviewed • Rank 5.3 • Science 100%

madupite: A High-Performance Distributed Solver for Large-Scale Markov Decision Processes - Published in JOSS (2025)

Scientific Software
Updated 6 months ago

The jagstargets R package — Peer-reviewed • Rank 10.8 • Science 93%

The jagstargets R package: a reproducible workflow framework for Bayesian data analysis with JAGS - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

The stantargets R package — Peer-reviewed • Rank 5.1 • Science 93%

The stantargets R package: a workflow framework for efficient reproducible Stan-powered Bayesian data analysis pipelines - Published in JOSS (2021)

Updated 6 months ago

BracketingNonlinearSolve • Rank 20.6 • Science 77%

High-performance and differentiation-enabled nonlinear solvers (Newton methods), bracketed rootfinding (bisection, Falsi), with sparsity and Newton-Krylov support.

Updated 6 months ago

parpe • Rank 6.6 • Science 85%

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

Updated 6 months ago

t-elf • Rank 5.5 • Science 85%

Tensor Extraction of Latent Features (T-ELF). Within T-ELF's arsenal are non-negative matrix and tensor factorization solutions, equipped with automatic model determination (also known as the estimation of latent factors - rank) for accurate data modeling. Our software suite encompasses cutting-edge data pre-processing and post-processing modules.

Updated 6 months ago

jurassic • Rank 3.2 • Science 85%

The Juelich Rapid Spectral Simulation Code (JURASSIC) is a fast infrared radiative transfer model for the analysis of atmospheric remote sensing measurements.

Updated 6 months ago

PencilArrays • Rank 10.1 • Science 77%

Distributed Julia arrays using the MPI protocol

Updated 6 months ago

iasi • Rank 0.0 • Science 85%

This repository provides a collection of codes for the analysis of remote sensing observations of EUMETSAT's Infrared Atmospheric Sounding Interferometer (IASI).

Updated 6 months ago

gps • Rank 0.0 • Science 85%

This repository provides a collection of codes for the analysis of GPS/RO observations.

Updated 6 months ago

https://github.com/stfc/psyclone • Rank 15.5 • Science 67%

PSyclone is a source-to-source Fortran compiler designed to programmatically optimise, parallelise and instrument HPC applications via user-provided transformation scripts.

Scientific Software
Updated 6 months ago

batchtools — Peer-reviewed • Rank 20.0 • Science 59%

batchtools: Tools for R to work on batch systems - Published in JOSS (2017)

Updated 6 months ago

clustermq • Rank 18.8 • Science 59%

R package to send function calls as jobs on LSF, SGE, Slurm, PBS/Torque, or each via SSH

Updated 6 months ago

PencilFFTs • Rank 9.7 • Science 67%

Fast Fourier transforms of MPI-distributed Julia arrays

Updated 6 months ago

calibr • Rank 0.0 • Science 75%

Parallelized Bayesian calibration of simulations using Gaussian process emulation

Updated 6 months ago

biomero • Rank 10.2 • Science 64%

BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster

Updated 6 months ago

sundials • Rank 10.3 • Science 62%

Official development repository for SUNDIALS - a SUite of Nonlinear and DIfferential/ALgebraic equation Solvers. Pull requests are welcome for bug fixes and minor changes.

Updated 6 months ago

pyhpc-benchmarks • Rank 6.9 • Science 64%

A suite of benchmarks for CPU and GPU performance of the most popular high-performance libraries for Python :rocket:

Updated 6 months ago

aspect • Rank 11.3 • Science 59%

A parallel, extensible finite element code to simulate convection in both 2D and 3D models.

Updated 6 months ago

https://github.com/ornladios/adios2 • Rank 19.3 • Science 49%

Next generation of ADIOS developed in the Exascale Computing Program

Updated 6 months ago

airs • Rank 1.1 • Science 67%

The AIRS Code Collection enables data processing and analysis for remote sensing observations captured by NASA's Atmospheric InfraRed Sounder.

Updated 6 months ago

PoissonRandom • Rank 14.1 • Science 54%

Fast Poisson Random Numbers in pure Julia for scientific machine learning (SciML)

Updated 6 months ago

kokkos • Rank 13.3 • Science 54%

Kokkos C++ Performance Portability Programming Ecosystem: The Programming Model - Parallel Execution and Memory Abstraction

Updated 6 months ago

walky • Rank 11.8 • Science 54%

A Highly Parallelized TSP Solver using MPI

Updated 6 months ago

SimInf • Rank 15.3 • Science 49%

A framework for data-driven stochastic disease spread simulations

Updated 6 months ago

https://github.com/precice/precice • Rank 12.1 • Science 49%

A coupling library for partitioned multi-physics simulations, including, but not restricted to fluid-structure interaction and conjugate heat transfer simulations.

Updated 6 months ago

PreallocationTools • Rank 17.0 • Science 44%

Tools for building non-allocating pre-cached functions in Julia, allowing for GC-free usage of automatic differentiation in complex codes

Updated 6 months ago

https://github.com/exalearn/colmena • Rank 14.6 • Science 46%

Library for steering campaigns of simulations on supercomputers

Updated 6 months ago

conduit • Rank 5.6 • Science 46%

C++ library that wraps intra-thread, inter-thread, and inter-process communication in a uniform, modular, object-oriented interface, with a focus on asynchronous high-performance computing applications.

Updated 6 months ago

opencl-benchmark • Rank 5.5 • Science 44%

A small OpenCL benchmark program to measure peak GPU/CPU performance.

Updated 6 months ago

entropy-core-problem • Rank 0.0 • Science 44%

Repository for suppelementary material from my publications on the entropy core problem

Updated 6 months ago

crew • Rank 16.4 • Science 26%

A distributed worker launcher

Updated 5 months ago

https://github.com/cryotools/osaris • Rank 4.8 • Science 33%

Scripts to facilitate parallel InSAR processing and analysis of Sentinel-1 time series on HPC clusters based on GMTSAR and Slurm.

Updated 6 months ago

https://github.com/albumentations-team/albucore • Rank 4.8 • Science 26%

A high-performance image processing library designed to optimize and extend the Albumentations library with specialized functions for advanced image transformations. Perfect for developers working in computer vision who require efficient and scalable image augmentation.

Updated 6 months ago

https://github.com/agnostiqhq/covalent-cloud-github-workflow • Rank 3.2 • Science 13%

Template for integrating Covalent Cloud's high-performance computing capabilities into GitHub Workflows

Updated 6 months ago

https://github.com/hypershell/hypershell • Science 26%

Cross-platform, high-throughput computing utility for processing shell commands over a distributed, asynchronous queue.

Updated 6 months ago

introduction_hpc • Science 52%

[WORKSHOP] Introduction to High Performance Computing

Scientific Software
Updated 6 months ago

CaNS-Fizzy — Peer-reviewed • Science 93%

CaNS-Fizzy: A GPU-accelerated finite difference solver for turbulent two-phase flows - Published in JOSS (2025)

Updated 6 months ago

spinfoam_radiative_corrections • Science 44%

Codes for the computation of the radiative corrections to the EPRL spin foam propagator in covariant LQG.

Updated 6 months ago

delicoco-ieee-transactions • Science 67%

In compressed decentralized optimization settings, there are benefits to having multiple gossip steps between subsequent gradient iterations, even when the cost of doing so is appropriately accounted for e.g. by means of reducing the precision of compressed information.

Updated 6 months ago

geoslicer • Science 39%

Open source digital rocks software platform for micro-CT, CT, thin sections and borehole image analysis. Includes tools for: annotation, AI, HPC, porous media flow simulation, porosity analysis, permeability analysis and much more.

Updated 6 months ago

elexi • Science 49%

Open Source High-Order Unstructured Discontinuous Galerkin Fluid Dynamics Solver with Euler-Lagrange Extension