Data

Tools

Indexes

Applications

Experiments

Open Source Science

Updated 10 months ago

circrna • Rank 6.1 • Science 57%

circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

Updated 10 months ago

ceRNAnetsim • Rank 12.0 • Science 46%

Simulation of interactions miRNA:Competing Targets

Updated 10 months ago

seqcluster • Rank 8.5 • Science 49%

small RNA analysis from NGS data

Updated 10 months ago

isomirs • Rank 6.1 • Science 36%

analyze isomiRs from seqbuster tool

Updated 10 months ago

miRSM • Rank 12.3 • Science 26%

miRSM: Inferring miRNA sponge modules by integrating expression data and miRNA-target binding information

Updated 10 months ago

mirsponger • Rank 3.4 • Science 26%

Identification and analysis of miRNA sponge regulation

Updated 10 months ago

xicra • Rank 9.5 • Science 13%

Small RNAseq pipeline for paired-end reads

Updated 10 months ago

SeedMatchR • Science 23%

Off-target analysis of siRNA knock down paired with RNAseq

Updated 9 months ago

https://github.com/llrs/mirna-ha • Science 13%

Efforts to relate miRNA from blood to clinical variables from alcoholic hepatitis

Updated 10 months ago

mirit • Science 39%

An open-source R package to comprehensively explore the role of impaired miRNA regulatory networks in complex biological conditions.